Clupea harengus (Atlantic herring): 105889283
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Entry
105889283 CDS
T09045
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105889283 (nefma)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
105889283 (nefma)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
105889283
NCBI-ProteinID:
XP_031433937
Ensembl:
ENSCHAG00000011577
UniProt:
A0A6P8GEN2
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Position
12:complement(6021213..6026385)
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AA seq
890 aa
AA seq
DB search
MSYPMDSMGSRRMMDSRSTYVRSSGSPSSGYRSQSWSRASPGSTLTYKRTVSTPVARAYS
SNVLSSADSVDFNQTSILNGDYKRTNEKEQLQGLNDRFAGYIDKVHYLEQQNRQIEAEIQ
ALRQRQASQSKLGDVYDQELQELRTMLEQIHHEKAQIHLDTEHIEEDIQRLRDRFDEEAR
IREETEAIIRVLKKDMTDSTLVKAEMEKKVQSLQDEIAFIRNNHEEEVNELLAQVQESQI
TLEKRDYQKTDLTEALREIRSQLEGHSSQNLQQVEDWFMCRFSKLNDAAEQNKDAIKSAR
DEIADYRRQLQSKTIELESVRGTKDSLERQLTDIEDRHNGDLSNLQETVNQLDNELKSTK
WEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTYPYRQSVPTKISKVKSEPPK
LKVQHKFVEEIIEETRVEDEKAEMDEALAEIAEELAAALGGQAGGEEEEGEGEGEEGEEA
GEEEGEKGDEEEGEAEEEVVASSDAKLSASAPGEEEEKEEEEGGQKEEGDEDEEGEGGEE
GKKDGEEGEGEGGEGEGGEEKGEKGDEGEGGEDEAQEEGDEVEETVLSTKATESKVSPDK
EKAGEKEGSGAEEEKAEKEEAGDEQEEADAGSDKGSHSGDEKETKVEPEKKGEATKDEKK
EEKSEATKAEAPKTESPKTETAKPEAPKSPKSESPKSESPRSESPKPEAEKSEPSKTEAP
KTPKAESPTKEEPKAAEPPKEEKKSETPKADAPKAETPKADTPKADTPKAAPEKIEKSEP
EPEEKKEEKKEADKSKEEEEEKKELAEKEVISNGVEESPTKDDPSQKVIVTKTVETITTG
EDGAKHVTKSVTVTETVKETEEEVQEKLVSTKKVEKHSSESVKQVVTEAE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagctacccgatggactctatggggagtcggagaatgatggactcgaggagtacctac
gtccgctcaagcggctccccctccagtgggtatcgttctcagtcttggtcccgtgcaagc
cccggttccacattaacgtataagaggaccgtcagcacgccggtggccagagcctacagc
tccaatgtgctcagctccgccgacagtgtcgacttcaaccagacatcaattctaaacgga
gactataagcgcacaaacgagaaggaacagctccaggggctcaacgaccgcttcgccggt
tacatcgacaaggtgcactacctggagcagcagaacaggcagattgaggctgagatccag
gcactgcggcagaggcaagcgtcgcagtctaaacttggtgatgtttacgaccaggagctg
caagaactgcgcaccatgctggagcagatccaccacgaaaaggcgcagattcacctggac
acggagcacatcgaggaagacatccagaggcttagggaccgctttgatgaggaagcccgt
atcagggaggagacggaagccatcatccgtgtgctgaagaaggacatgacagattcgaca
ttagtgaaggcagagatggagaagaaagtccagtcactgcaggatgagatcgctttcatt
cgcaacaaccacgaagaagaggtgaatgagctgctggcgcaagttcaagagtcgcagatc
actctggagaagagggactaccagaagaccgacctcaccgaagcgcttcgggagatccgc
tcacaactggaagggcactcttcccaaaacctacagcaggtagaggactggtttatgtgc
cggttttccaagctgaacgacgcagccgaacagaataaagatgccattaaatccgcccgg
gatgagatcgcagactaccgccgccagctccagtccaagaccattgaattggagtctgtc
cgaggcacgaaggattctcttgaaagacaacttactgacatcgaggaccgacacaacggt
gacttgtccaaccttcaggaaacagttaatcaactggacaatgaactgaagagcacgaaa
tgggaaatggctcgccacttgcgcgagtaccaagatctactcaatgtcaagatggctctt
gatatagagattgctgcttacaggaaacttctggaaggagaggagacacacttcagcacc
tacccataccgtcagtctgtccccaccaagatctccaaggtcaaaagtgagcctcccaaa
ctgaaagtgcagcacaagtttgtagaggagatcattgaggagacccgtgttgaggatgaa
aaggctgaaatggatgaggccctggctgagatagcagaagagctggctgctgctcttgga
ggacaggcgggtggagaggaggaagaaggtgaaggagaaggtgaggaaggtgaggaagca
ggtgaagaggagggagagaaaggagatgaggaagagggtgaggcagaggaggaggtagtg
gcctccagcgatgctaaactcagtgctagtgctcctggtgaggaggaagagaaagaggaa
gaggaaggtggacaaaaagaggaaggtgatgaagatgaagaaggagagggtggtgaagag
ggaaagaaagatggagaagaaggagagggagaggggggagagggagagggaggagaggag
aaaggagagaagggtgatgagggagagggaggtgaggatgaggctcaggaagagggagac
gaggtggaggagactgtgctgagcaccaaggctacagagtctaaggtctctccagacaaa
gagaaggctggagagaaggagggaagcggtgcagaagaggaaaaagctgaaaaagaagag
gccggtgatgaacaagaagaagctgatgcaggaagtgacaagggttcccacagtggtgat
gaaaaggagacaaaagtagaaccagagaagaagggggaggccaccaaagatgaaaagaag
gaagagaaatctgaagcaaccaaggctgaagccccaaagacagagtctcccaagactgaa
actgccaaaccggaggccccaaagagcccaaagagtgaatccccaaagagtgaatcccca
aggagcgagtccccaaaacccgaagctgagaagagtgagccatccaagacagaagctcca
aagacccccaaggctgagagccctacgaaagaggaacccaaagctgcagaaccacctaag
gaggaaaagaaatctgagacccccaaagctgatgcccccaaggctgagacccccaaagct
gacacccccaaagctgacacccccaaggctgcacccgagaaaatagagaagagtgagcca
gagccagaggagaagaaagaagaaaagaaagaagccgacaaaagcaaggaggaagaggag
gagaagaaagagcttgccgagaaggaggtgatctccaacggagtcgaggaaagccccacc
aaagatgaccccagccagaaggtgatcgttaccaaaactgtggagacaatcaccactgga
gaagatggagcgaaacatgtaacaaagtccgtgaccgtcactgaaacagtcaaggaaaca
gaggaggaggtgcaggagaagctggtctccacaaagaaggtggagaagcactcctctgag
tctgtcaagcaggttgtcactgaggctgaatga
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