Clupea harengus (Atlantic herring): 105889338
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Entry
105889338 CDS
T09045
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105889338 (scrib)
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Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_LRWD1
LRR_9
Tim54
Motif
Other DBs
NCBI-GeneID:
105889338
NCBI-ProteinID:
XP_031439490
UniProt:
A0A6P8GXK5
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Position
17
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AA seq
1981 aa
AA seq
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MLKCIPLWRCNRHVESVDKRHCSLQTVPDEIYRYSRTLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSSL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRDNLLKALPTSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLTLLPPELGNLRRLVCLDISQNRLEELPNELS
GLLALTDLLLSQNLLEVIPDSIGSLKQLSILKVDQNRLLQLTDSMGDCENLTELMLTENL
LQALPCSLGKLKKLTNLNVDRNRLGTVPPELGGCTCLNVLSLRDNRLAKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
TPSLENLLQNSLDESWTDSNLNRVSVIHFQEEAKPEDDDDEAAAERRQGLQRRATPHPSE
LKVMKKVIEERRNEAYTAKPDGDLESPGSEEKRLSGLSNQSHDSQASNSTASANSHNERQ
GLNNQGHALLVGHRQDAEEEELDEMEVEYIEPTVHFAEDPVIRGGDEDDEHEDDDDAGSD
DNAEPPPPYPGMKQRLIRKDTPHYKKHFKITKLPKPEAVAALLLQGYNPETIPHSPHNQN
NEDEEEEDDEEEEEEEGKDMGQRDEEEEEEEEREMTASTPLIQRTPGPELENSRHVNSSL
QPVKGVSFDQVNNLLIEPARIEEEELSLTIHRQTGGLGISIAGGKGSTPYKGDDEGIFIS
RVSEDGPAARAGVKVGDKLLEVNDVCLQGAEHHTAVEALRSSGVAVTMTVLRERMVEPEN
AITTTPLRPEDDYFPRERRSSGVPFCMEPDSPAPPTNTFRLSTCLLRNDKGLGFSIAGGK
GSTPYRTGDTHIFISRIAEGGSADRDNVLKVGDRVISINGVDMTEARHDQAVALLTGTSP
TIALLVEREQGPSAGRGRPHSPPPPEPSDSPEQEEPNDEQGNHLSRPMEDEYPIEEVILV
KAGGPLGLSIVGGSDHASHPFGVNEPGVFISKVIAHGLACKSGLRVGDRILEVNTTDLRH
ATHQEAVRALLSNKNEIRMLVRRDPSPPGMQEIVILKQPGEKLGISIRGGARGHAGNPFD
PTDEGIFVSKVSSMGAAARDGRLVMGMRILEVGNHSLLGMTHTEAVRVLRSTGDTLVMLV
CDGFDPQNVTGIEASPGVIANPFASGIVRKNSMESISSIDRDLSPEEMDILQKEVEMARE
TSQWEREELDKVERMRLEREEATRQLEEEAENLSSGPLKLDYKTLAALPTTSLQKVNRYS
PSFSASIPMEAALQCIAPVDPLAFEPGVVLTTYFSPEPITLLPAPSVLTQEPPMQHPAAE
GEEEEEECLVDSQPICFSENPFLLANRKGKGRPPQERVLSGPPVGYGKKGQLQPWMYSKA
PSADTQRMDSPIRDMSYSPSSQPPSVTHYSSPPQPSGGRETRFASIHFTPNATAKDNSST
KPGVIQPMSRMRQTSSPSSQDGHSSPNPFQHGPSPINSQTSPRAPSPDTIEDFPINIKQA
YKAFAAVPHSLAVLEPPQDKYVQRNNNVHPVQPSPEPSLRDDVFADEEEVDEGPDSVSPH
PSLASDRRDYVSLAAVPRLSRASVEMKTPSPSGKDSPEQRSFRDRQKYFEIDVKQQTPDS
KPKPRVSLVGEDDLKKMKEEEAKRFDQSARDFLLDEDEEEEDDLAKQVAAMKASGKVVLD
GVEYKVESVGGNSSHSATPPRQCATPPNYSTPPPSYCGTPGPSLVDGRGDSQRNSMEESF
RLDQRPNSMTGLVPMYPGGGESGAPIRTAKAERRHQERVRMQSPELAVASDKDMSPSEKR
ALEAEKRAMWRAARMKSLEQDALKAQMVIAKSKENKKRSTLDQLAESPSPAPTPSPTPLE
DISPRGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDTSDNMRYIDDGSSNPGDFL
G
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgtattcccctgtggcggtgtaaccgccacgtcgagtcggtggacaagcgg
cactgctccttgcaaacagtccccgacgagatctaccgttacagtcgaaccctagaggag
cttcttttggacgccaaccagctgaaggagctgcccaagccattcttccgcctgctgaac
ctgcgtaagctgggcctgagtgataatgagatccagcggctccctcctgaggtggcaaac
ttcatgcagctggtcgagctcgacatctccagaaatgacattcctgagatccctgagagc
attaagttctgcaaagcgctggagatcgccgacttcagcggaaaccccctctcaagtttg
ccagatggcttcacacagctccgaggccttgcccacctcgcactcaacgatgtgtctctg
cagactctacccaacgacataggaaatctggccaacctggtgaccctggagctgagggac
aatctgctgaaggctttgccaacgtctctgtccttcctcgtaaaactggagcagctggat
ctgggcagcaatgtgctggaagtgctgccggacacactgggtgctctccctaacctacgt
gagctgtggttggacaggaaccagctgaccttattaccacctgagcttggtaacctgcgc
cggctcgtgtgcctggacatctcccagaaccgtctggaggaactgcccaatgagctgagc
ggtctgctggccctcaccgacctactgctctcccagaacctcctggaggtcatccccgac
agcattggctccttgaagcagctgtccattttgaaagtggaccagaaccggcttctacaa
ctcactgactccatgggagactgtgagaacctgacggaactcatgctgacagaaaacctc
ctgcaggctctgccctgctccctggggaagctgaagaagctgaccaacctgaacgtggac
cgaaaccggcttggcacggtgccccctgagctgggcggctgtacttgcctgaacgtgctg
tcgctgcgggacaaccgcctggccaagctgcctgcggagctcgccaacgccactgagctg
cacgtgctggacgtggctgggaacagactgcagaacctgccgtttgctctggctaacctg
aacctgaaggccatgtggctggcagagaaccagtcgcaacccatgctcaagttccagaca
gaggacgacgagcagacgggagaaaaggtgctcacctgctatctgctgccgcagcaaccc
accccaagccttgagaacctactgcagaatagcttggatgaaagctggacagacagcaac
ttgaaccgagtgtcagtcatccacttccaggaggaggccaagccggaagacgacgatgat
gaagctgctgctgagcgaaggcagggtctccagcgcagggcgactccccaccccagtgag
ctgaaggtgatgaagaaggtgattgaggagcgcaggaacgaggcctacaccgccaaacca
gatggagacctggagtctcctggctcagaggagaagcgcctgagtggattgtccaatcag
agccacgactcgcaggcctccaacagcactgcctctgctaactcccacaatgagaggcag
ggcctcaacaaccaggggcacgctctgcttgtcgggcacaggcaggatgcggaggaggag
gagctagatgaaatggaggtggagtatattgagcccactgtgcactttgccgaggacccc
gtcatccgaggcggcgacgaggacgatgagcatgaggacgatgacgacgccggtagcgac
gacaacgcggagccgccgccaccttaccccggcatgaagcagcgtctgatccgcaaggac
acaccgcactacaagaagcacttcaagatcaccaagctgcccaagcctgaggccgtggcc
gccctcctactgcagggatacaaccctgaaaccatcccccactctcctcacaaccagaat
aatgaagatgaggaggaggaggatgatgaggaggaggaggaggaggaggggaaggacatg
gggcagagagatgaggaggaggaggaagaggaggagagggagatgaccgcctccacccca
ctgatccagcggacgccgggcccagagttggagaacagccggcacgtcaactcctccctg
cagccggtcaagggggtgtcatttgatcaagtcaataatctgctgattgagcctgctcga
attgaggaggaagagctgagcctgaccatccacaggcagacaggaggtcttggcatcagc
attgctggtggaaagggttccacgccctataagggggatgatgagggcatctttatctcc
agagtgtcagaggatgggccagctgcgcgtgctggagtcaaagtgggagacaagctcctt
gaggtcaatgacgtctgtttgcagggggcagagcaccacacagcagtggaggcgctgcgg
agctcgggtgtggccgtcaccatgactgttctgcgggagcggatggtggaacccgagaat
gccatcaccaccacgccgctgaggccagaggacgattacttcccgcgggagcgccgctcc
agtggggtgcccttctgcatggagcccgactcccccgcgccccccaccaacaccttccgc
ctgtccacttgcctgctgcgcaacgacaagggcctgggcttcagcatcgccggaggaaag
ggctcgacaccctaccggaccggagacacacatattttcatctctcgtatcgcagagggt
ggatcagcagaccgagacaacgtcctcaaagtgggagacagggtcatctctatcaatggt
gtagacatgacagaggccaggcatgaccaggcagtagcgttgcttaccggaacctccccc
accatcgccctgctggtggaacgcgagcagggcccctctgccggccgcggccgcccacac
tcccccccgcccccagagccctctgactcccccgagcaggaggaacccaacgacgagcaa
ggcaaccacctcagccgccccatggaggacgagtaccccatcgaggaagtgatcttggtg
aaggcaggtgggccactggggctgagcatcgtgggtggcagcgatcatgccagccacccg
tttggtgtcaacgagcctggcgtcttcatctcaaaggtgatcgcccacgggctggcgtgc
aagagcgggctgcgtgtgggcgatcggatcctggaggtgaacaccactgacctgcggcac
gccacgcaccaggaggcggtgagggcgctgctctccaacaagaatgagatccgcatgctt
gtgcgcagggacccctctccaccgggcatgcaggagatcgttatcctgaagcagccaggg
gagaagctgggcatcagcatcagaggaggagccagaggccacgctgggaaccccttcgac
cccacggatgagggtatcttcgtctccaaggtgagctccatgggagcggcggcccgtgac
ggcaggctggtcatgggcatgcgtatcctggaggtgggcaaccacagcctactgggtatg
acgcacacggaggcggtacgggtgttgcgctccaccggagacacactggtgatgctggtg
tgcgacggctttgaccctcaaaacgtcacgggcatcgaggcgtcacctggggtcatcgcc
aacccatttgcgagtggaattgtccgtaaaaacagcatggagagcatctcatctatcgac
cgtgacctgagccctgaggagatggacatcctgcagaaggaggtggagatggcgagggag
acctcccagtgggagcgggaggagttggataaagtggaacgtatgcgtttggagcgcgag
gaggccacacggcagctagaggaagaggccgagaacttgagcagcggccctctaaaactg
gactacaaaacactggcagcactgcccacaaccagcctgcagaaggtcaacaggtactct
ccctcgttctctgcttccatcccaatggaggctgccctgcaatgcattgcccctgtagac
cctctggccttcgagccgggggtggtcctcaccacgtacttttcacctgagcccatcacc
ctgctccctgcaccaagcgttctcacccaggagccacccatgcagcatcctgctgcggaa
ggagaagaggaggaggaggagtgtctggtggactcccaacccatctgcttcagtgaaaac
cccttcctgttggccaatcgcaagggcaaaggtcgccccccacaagagcgtgttctgtct
ggtccaccagtgggctacgggaaaaagggccagctgcagccctggatgtactctaaggcg
ccctccgcagacacccagaggatggacagtcccattcgtgatatgtcctactcacctagc
tcccagcccccatctgttacgcactactcctccccacctcagccgtctggtggcagagag
acccggtttgccagcatccatttcacccctaatgccactgccaaggacaattcatctacc
aagccgggtgtcatccagcccatgtctcgcatgaggcagacgtcctcgccatcgagtcag
gatggccacagcagccctaaccccttccagcatggcccctcccccatcaactcccagact
tctccgcgcgccccttcccctgacacaattgaagattttcccatcaatatcaagcaggcc
tacaaggcctttgccgctgtgccccactctctggcagtgctggagccacctcaggacaaa
tatgttcaacggaacaacaatgtccaccctgtacagccatctcctgagcccagtcttaga
gatgatgtgtttgcggatgaggaggaggtggatgagggaccagactctgtctctccccac
ccctccctcgcctcagatcgccgtgactacgtgagtctggcggcagtgccacgtctttca
cgggcctctgtggagatgaagacacccagtcctagtggaaaggacagcccagagcagcgg
tccttcagggatcggcagaagtactttgagatcgacgtgaagcagcagactccagacagt
aagcccaagccccgcgtgtccctggtgggggaggatgacctgaaaaagatgaaggaggag
gaagccaagcggttcgaccagagtgcacgggacttcttgctcgacgaagatgaggaagaa
gaggacgaccttgctaagcaggtggcggcgatgaaggctagtgggaaggtggtgctggat
ggcgtggagtataaggtggagagtgtgggtgggaacagctcccattcggccacgcccccc
aggcagtgtgctacgccccccaactacagcaccccaccgcccagctactgtggaacacca
gggccttcattagtagatggtaggggagactcccagagaaactccatggaggagtccttc
agactggaccagaggcccaactccatgactggactggtgcccatgtaccctggtggtggt
gagtctggagcgcccatccggactgccaaggccgagcgcaggcaccaggagcgtgtgcgc
atgcagagccccgagctggccgtggcctcggacaaggacatgtcgcccagtgagaagcgt
gccctggaggccgagaagagggcaatgtggagagcagccaggatgaagtctctggagcag
gacgccctgaaggctcagatggtcatcgccaagtccaaggagaataagaagcgcagcaca
ctggaccagctggccgagtccccctcgccggcccccaccccctcccccacgcctctggaa
gacatcagtcctcgaggtgtgacgtcaccgggcagactgtccctgtcagaaaagaagttt
gactaccgacagtttgctgccattccttcttccaaacctgtttacgacatccagtctcct
gacacttctgacaacatgcgctacattgacgacggctccagcaacccaggtgacttcctg
ggataa
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