Clupea harengus (Atlantic herring): 105889348
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Entry
105889348 CDS
T09045
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105889348 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889348 (ube3c)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105889348 (ube3c)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
105889348 (ube3c)
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
105889348
NCBI-ProteinID:
XP_012670608
Ensembl:
ENSCHAG00000007714
UniProt:
A0A6P3VG34
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Position
17:9204115..9239120
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AA seq
1097 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGYQ
DRKQQHSIQRGRFDHCVCQAQSAGVPSLADPSALSFLVRQLLFFYRQREDTHRLIWMCQN
LVKHHAQFVSLLAGPERQTCVFQIKRLLGHCCRLLKLCRDDSLNVAVPMRMLEVFSSERT
YVSVLQDANCVTALIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPSIPVASTLLEH
TLKPLHFNYTSCSADARQYVFSAFTEEFISVPFTEQVFHFFIPALSDPRLAFPFQPFLAS
LRATVVSSATMQAQAPWLLYFVLSVGETNLGSLSEEGLLLYLSALQTLLPLLPVSESTSR
TEVSSDSEDEEATNKHALSSQDDFRISVQLITAECIQKLDTKEQTNALLTLVWRDSASEE
VFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLICSMTTKMITGSMVPLLQ
VLSRGSPMSLEDSNRIIPLFYLFSSLFSHALISVHDSEFFGSSIEGAWSFHLVTGTICCN
NEPQSSSMMPFSLIELVSLSRCMRDAGLGIIKLAYPETKSEHREEYLAAFRSVGVTTNAA
VQQRIQAQQKRWVQLFKVITNLVKMVKARDIRRPFCPRGHWLSQEVNISADKVTQLYVPS
ARHMWRIRRMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLI
YADKRDVQGDGPFLDGISVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAG
IDGGGIFREFLNELLKTGFNPNQGFFKTTNEGLLYPSPSADMLVGDSFTRHYYFLGRILG
KALYENMLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYDEDVEDLGLN
FTIVNNDLGEAQVVELKPGGKDVPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANV
VNLEWLRMFDQQEIQVLISGAHVPICLDDLKKFTNYSGGYAATHPVITIFWEVVESFTDD
EKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFCDQHLM
RNKLLYAIESSAGFELS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgagggtgatttcaaaacaagacccaaggtgtcccttgggggagcaagc
agaaaggaggagaaagcatcacttcttcatcgcactcaagaagagagacggaaacgtgag
gatgaacgacgaagactgaaaaatgctatcatcatccagtcctatatccgaggataccag
gaccggaaacagcagcactccatccagagggggcggtttgaccattgtgtgtgccaggct
cagtctgctggggtcccttcgctggcggacccctccgctctcagcttcctggtgcggcag
ctgctgttcttctacaggcagcgtgaggacacacacagactgatatggatgtgccagaac
ctggtgaagcaccacgcccagtttgtgagcctcttggcagggccagagaggcaaacgtgt
gtctttcagatcaagaggttgctgggacactgctgcagactgttgaagctgtgcagggat
gacagtttgaatgtggcagtgcccatgaggatgctggaggtcttctcttcagaaagaacc
tatgtgtctgttctgcaggacgctaactgcgtaacagcacttattgagcaaattttgcac
tatatggttcaaaaaggatactacaggtctctttatattttggtgaatcacaagttgccg
tcgagtttggagtacagcgatgccccctcaatccccgtggctagtactttgctggagcac
actctcaagcctctgcactttaactatacctcctgttcagcagatgccaggcagtacgtg
ttctcagccttcacggaggagttcatttcggttccgttcaccgagcaggtgttccacttc
ttcatccccgcactgtcagacccacggttggccttcccgttccaacccttcctggcttcc
ctccgggctactgtagtttcctccgccaccatgcaagcacaggccccctggctcctatac
tttgtgctctctgttggagagactaacctaggatctctgtctgaggagggtctgcttctg
tacctgagtgccctgcagactctgctgccactgttgccagtgtctgagagcaccagcaga
accgaggtcagcagcgactcggaggacgaggaggcgacaaacaagcacgccctctcctca
caggatgactttaggatctcagtccagctgatcacagcggagtgcattcagaagctggac
accaaggagcagaccaacgcgctcctgacgctggtgtggagggactctgccagcgaggag
gtcttcaccatgatggcctccatctgccacacgctcatggtgcagcatcgcatgatggtg
cccaaagtcaggctactgtacagtttggccttcaacgcccgcttcctcagacatctctgg
cacttgatctgctccatgacaacaaagatgatcacaggctccatggttcctctgttgcag
gtgttgtctcgaggttctcccatgtccctggaggactccaaccgtatcattcccctcttc
tatctcttcagctcgctcttcagtcacgccctcatctctgtgcacgactccgaattcttt
ggctcctccattgaaggtgcctggagttttcatctggtcaccggtacaatatgctgtaac
aacgagccccagtcgtcctccatgatgcccttctccctgatagagctggtttccctgtcg
cgctgcatgcgggatgccggcctgggcatcatcaagctggcctaccccgagaccaaaagc
gagcaccgcgaggagtacctggcggccttccgcagcgtgggggtcaccaccaacgccgct
gtgcagcagcgcatccaggcccagcagaagcgctgggtgcagctcttcaaggttatcaca
aacttggtgaagatggtgaaggcgcgcgacatcaggcggcctttctgtccccggggccac
tggctctctcaggaggtcaacatcagtgctgataaggtcactcagctctatgtcccgtca
gcacgccacatgtggaggatcaggaggatgggccgcatcggacctctgcagtccacgctc
gatgtggggatggagccccctcagctctctgtgtctgaggagcggcacctggccatcctc
acagagcttccgttcgtggttccctttgaggagagagtcaagatcttccagcgtctcatc
tacgcagacaagcgggacgtgcagggggacgggcccttcctggatggcatcagcgtcact
atccgcaggaactacatctatgaggacgcctacgacaagctgtccccagagaatgagcct
gacctgaagaagcgaatccgggtgcacttactcaacgctcatggtctggacgaggccggg
attgacggcgggggcatcttccgggagttcctgaacgagctgctgaagacgggcttcaac
cccaaccagggcttcttcaagaccaccaacgagggtcttctctaccccagccccagcgct
gatatgttggtgggggactcctttacccgccactactacttcctgggcaggatcctgggg
aaggccctgtatgagaacatgctggtggagttgccgtttgccagtttcttcctgtccaaa
ctgctgggcacgagtgcggatgtggatattcatcacttggcctctctggacccggagatg
taccggaaccttctgttcctgaagagctacgacgaagatgtggaggacctgggacttaac
ttcaccatcgtcaacaacgaccttggggaggctcaggtggttgagctgaagccgggcggc
aaggacgtcccagtgaccacggcaaaccggatagcctacatccatttagtggcagattac
cgcctgaacaaacagatccggccgcattgcctggcctttcggcagggcctggccaatgtg
gtcaacctggagtggctacgcatgtttgaccagcaggaaatacaggtgctgatctctggt
gctcatgtaccaatttgccttgatgacctaaagaagttcactaactattcaggtggttac
gcagccacccacccagtcattacgatcttctgggaggttgtggagagtttcacagatgac
gagaagaggaaactgctgaagtttgtcaccagctgttcacgcccaccgctgcttggcttc
aaggagctgtacccagccttttgtatccacaatggcggcactgatctggagagactaccg
actgccagcacctgcatgaacctgctgaagctcccagagttctgtgaccagcacctgatg
aggaacaagcttctctacgccatcgagtcctctgcaggcttcgagctcagctga
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