Clupea harengus (Atlantic herring): 105889387
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Entry
105889387 CDS
T09045
Name
(RefSeq) alpha-amylase-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00500
Starch and sucrose metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105889387
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
105889387
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
105889387
NCBI-ProteinID:
XP_031439747
Ensembl:
ENSCHAG00000025015
ENSCHAG00000025296
UniProt:
A0A6P8GW60
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Position
17:10471639..10502118
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AA seq
529 aa
AA seq
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MKARWCLLALGLGLGVSHYHCRTRCGGTSIVHLFEWPWRDIAEECENYLAPNGFAAVQIS
PPSENVVVTQPWRPWWERYQPISYKLCSRSGTEQELRDMISRCNKVGVKIYADVVINHMC
SASAGEGRRSTCGSYFNAREEEFPSVPYSASHFNDDKCTTASGNIENYQDIYQLTASAAQ
VRDCRLVGLLDLAHRKEHVRERVAGYMNTLVDMGVAGFRVDACKHMWPEDLKAIYGRLHN
LNTEWFPEGSKPFVYQEVIDLGGEPIKASEYSRLGHVTEFKYGAKLGSVIRRWNGDKLAD
LKTWGESWGLMPSDQALVFVDNHDNQRGHGAGGASILTFWEPRMYKMAVAFMLAHPYGVT
RLMSSYRWDRSLVEGRVGGSCQDQNDWMGPPSYPDGSTKPVPINPDGSCGEGWVCEHRWH
QIRNMVMFRNVAHGQPLLNWWDNGGNQIAFGRGDRGFIVINNDDCTLDALLQTGMPAGSY
CDVISGQRTAAGMGCTGKRITVGEDGRAHFTIKATEQDPFVAIHAGSKL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaggtggtgtttattggcgctgggtcttggccttggtgtgtctcactaccac
tgcaggaccagatgtggaggaacatcaatcgtccatctgtttgaatggccttggagagac
atagctgaggaatgtgagaactatcttgccccaaatggctttgctgctgtgcagatttcc
cctcccagcgagaacgttgtggtgacccagccatggagaccttggtgggagagatatcag
ccaatcagctataagctctgctccaggtcggggacagagcaggagctgagggacatgatc
tccagatgcaacaaagttggggtgaagatctacgcagacgtggtcatcaatcacatgtgc
tcggcaagcgcgggggaaggcaggcgctcgacctgtggatcatacttcaatgccagagaa
gaggagttcccatctgtgccctactcagcttcccacttcaacgatgacaaatgcaccacc
gctagtggaaatattgagaattaccaagacatttatcagctcacagctagtgctgcgcag
gtgcgtgactgccgtctggtggggcttctggatctggcccatcgcaaggagcacgtgagg
gagagggtggctggctacatgaacacgcttgtggacatgggggtggccggtttcagggtg
gatgcctgcaaacacatgtggccagaggacctgaaggcaatctatggcagactgcacaac
ctcaacactgagtggtttccagaaggttccaaacctttcgtttaccaagaggtcattgac
cttggtggagaacccataaaggcgagtgaatactccaggcttggccatgtaacggagttc
aaatatggagctaagctaggatctgtcattcgcagatggaacggagacaagctcgctgac
cttaagacatggggagaaagctggggactgatgccttccgaccaggccctggtgtttgtg
gataaccatgacaaccagagagggcatggagcagggggggcatctattctcaccttctgg
gagccgagaatgtacaaaatggctgtggccttcatgctggctcatccttacggcgtgacc
agactgatgtcgagctaccgctgggaccggagtctggtggaagggagggtgggtggctcc
tgtcaggatcagaacgactggatgggccctcccagctatccagatggctccaccaagccc
gtccccatcaacccagacggcagctgtggggagggttgggtatgcgaacacagatggcat
caaatcaggaatatggtcatgttccgcaatgtggcccatgggcagccattattgaactgg
tgggacaatggcgggaatcagattgcttttggacgaggtgatcgtggattcatagtcatc
aataacgatgattgcactctggatgccctgctgcaaacgggcatgcctgcagggagctac
tgcgatgtgatatccggccagaggacagccgctggcatgggctgcacggggaagcggatc
accgtaggggaagatggaagagcccatttcaccatcaaggccaccgaacaggaccccttc
gttgccatccatgcaggctcaaagttgtga
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