Clupea harengus (Atlantic herring): 105889419
Help
Entry
105889419 CDS
T09045
Name
(RefSeq) microtubule cross-linking factor 1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105889419
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105889419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
105889419
NCBI-ProteinID:
XP_031416345
UniProt:
A0A6P8EWW4
LinkDB
All DBs
Position
22:13572316..13632414
Genome browser
AA seq
1913 aa
AA seq
DB search
MMESPNGSGNDTRPHIHQLEKKRLNRAPSPARPFLKDAHSRSPKTPAIVPKSPKLNKQQA
PTVPLATHSRLSRRTLTGAKDKPAPAKSHPKSSVTKKNVKVTQHVAASETKTASKVVDSS
PHLAKSKKGRIAPLSHGPLGHGSPICVPTGAIIGRVGQTDSSSDLSDCPSEPLSDEQRLA
QAPSSDAESGTGSGSSERDHVVADNPPQTASASEASEAPVARLRTVEASGVRGMSSPSAG
AHAEKSKQDKPAASTQCKLESSKELIEEDLLREIEELRSENDYLKDEVDELRAEMEEVRD
SYLEEEMYQLQELRRELDRSNKNCRILQYRLRKAEQRGLRAAQSGHVDGDLLRSLEQDLK
VAKDVSVRLHNELESVEDKRTRAEDENEMLRQKIIEVEISKQALHNELERRENALRRRGS
HKDKKSSMQEDSADLRCQLQFAKEESALMRKKMAKLGREKDELEQDLQKYKSVYGDMDSP
VASCDVPGGGPHSTREAELRLRLKLVEEEANILGRKLVELEVESRGLRAENEDLRAQWER
EWATREPALAGGGSGPASPYESVGELRRHLQFVEEEAELLRRSIAEMEDHNRQLTTELSR
FKFGPGDGDGEAGSGEGQVAGEGGVTVGSVGPLQEELKAARLQINEMSGKVLKLQYENRV
LVSNAQRCDLASHLGQTPGEGHTHTITVAIAREEEEEDDEEAGQALLLQPKREGPVGGES
DSEEVVERSATSGFCSSSGGVGLKPWEADLIGQRRRAEEGLRREAERLSRSVDHLIADTD
SLIHEGVVVVTAATESSGECESSSSATVVAAGEAKQDTAVLETVSARMKAFRAELQGFME
KVERLGDGQRERDRGDDLSPLPHLTESSSFLSTGTSLSRDSPIGTLGRDLLADLQIRDPS
APEITSPGRELQFRLDRLRPSQEDREGLTGSITQQEARRGLELQGLQTHEVPWPQERALL
QQELRLFSHHTVILYMKLRWILTHWRLGRRAEAGEEGAHAEYECLENIPDLSVTVETDDG
EGEIRPCAKITGGVGEVSDPGLLLASPDLYQHQKQQVGENRRVLHALRSLLEEFGCELRE
EEQRRLQLQQTYASERASWEIQRAEMRRCLAQLEEVASSSGGGAGAGASDPLKQEREEHR
RLLAESHGAALELRWRLHHGERRWSRERQELLEHFHRERQTWMQRELALPEGKEGGLQRV
FSPQESPCKPPRSPLSPRSHSDSEATLEDRGPAGRLRPLHTAESLFLDALSLDPPSQAQV
PPPSRLESEKRFPCLKEALNEISERAEPDAYSDEEPTSGSLLRAKSVCSMSDFQRLMDSS
PFLPDKASHLGERGGGRDRGEVTPPLSPDDLKYIEEFNSKGWELANALSASCPIPGPLTL
LGQPPLQPPLTPALEAWGDARRPTDPTVDPFQPGSWFLTTSATLTTSTLSSPEHCQPAPA
QLSPGAAAEHFGVRVLHSPTRGKDGGGGVAEEMFGGARWVSGGGGGYAAAAAAALELNLS
DDMKEVAFSVCNAIRPPPHASLPDRPLPALRDSACQTSGFTSRGTQTCHVVSVGLQTDAL
RALTSSPHRCLTPKGGGSTPVSSPSRTLRRPQYVPPGQAKFERPCCSPKYGSPKLQRKPA
STGKTEPVGGGVTGGGGGGANSGAPGTGGSSRTPTPTSTPQKGNSESAWARSTTTRDSPV
HTTINDGLSSLFNIIDHTPLAPEPAGGKFTRSPSRVKPQQATAGCESTVPPAGSDPKCTA
GGGGGAVQELLRGGVPRGRSPSPVQQLVIIETQGGEVTSIRQDLSAPPGHTLAENAARLL
NRKLQEQSTREDRRLQVVAVGPVQGAHGRDGRATDTGDKAGCLEDLPRSPVAPPLEACFQ
RPARPANRRPPSRWAARSPNSSPTWRSAATQRFRFPTQTIPELEEPSLEPHPA
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagccccaatggctccggcaacgacaccagaccgcacattcaccagctggag
aagaaacggttaaatcgtgcaccgtcccctgcgagacctttcctgaaggatgcccactcc
cgttctccaaaaacgcccgccatcgtaccaaaatctcccaaactcaacaagcagcaagca
cccacagtgccattagccacgcacagtcgtctgtcacggcgaaccttaaccggggcgaag
gacaagcccgcgccggcaaaaagtcaccccaagtcctcggtgaccaaaaagaacgttaag
gtcacgcaacatgtagcggcatcagagacgaaaaccgccagcaaagtggtcgacagcagt
ccacacctcgccaaaagcaaaaagggcagaatagcccccctctctcatggaccccttggc
catggttcccccatctgcgttcccaccggtgctattatcggccgtgtcggtcagacagac
agcagttccgacctgtctgactgcccttccgagccgctatccgacgaacagagactcgca
caggcacccagcagcgacgccgaatcagggaccggttccgggtccagcgaacgggatcat
gtggtggcagataatccgccgcagacagcgtcagcctcagaagcgagcgaggcgccagtc
gctcggctgcgcaccgtggaggcttccggagtgagaggcatgtcttcgcccagtgcaggt
gcacacgccgagaaaagcaaacaggacaaacccgctgcgagcacacaatgtaaactggag
agcagcaaggaattaatcgaggaggatctactaagggaaatagaagagctacgatctgaa
aacgactacctcaaggatgaagtggacgagctgcgtgctgagatggaggaggtgcgagac
agctacctggaggaggagatgtaccagctgcaggagctgcggcgtgagctggaccgctcc
aacaagaactgccgcatcctgcagtaccggctgcgcaaggccgagcagagggggctccgc
gccgcacagagtggacacgtggacggagacttgctgcgcagtctggagcaggacctcaag
gtggccaaagacgtgtcggtgcgtctgcacaatgaactggagagcgtggaggacaagcgc
acacgtgcggaggacgagaacgagatgttaaggcagaaaatcatcgaggtggagatctcc
aaacaggccctgcacaacgaactggagaggagagagaatgcactcaggaggagggggagc
cacaaagacaagaaatcttcaatgcaggaggacagtgcggacctgcgctgccagctacag
tttgccaaggaggagtctgctctgatgcgtaagaagatggccaagctgggccgcgagaag
gacgagctggagcaggatttgcagaagtacaagagcgtctatggggacatggacagcccc
gtggcctcgtgcgatgttcctggcgggggcccccacagcacacgcgaagccgagctgcgc
ctgcgcctcaagctggtggaggaggaggccaacatcctgggccgcaagctggtggagctg
gaggtggagagccggggcctgcgggccgagaatgaggacctgcgagcccagtgggagcgt
gagtgggcgacccgggagccggcgctggctggcggtggcagtggcccggcgtcaccgtac
gagtccgtcggggagctgcggcgccacctgcagttcgtggaggaggaggccgagctgttg
cggcgctccatcgccgagatggaggaccacaaccggcagctgaccaccgagctcagccgc
ttcaagttcggccccggggatggtgatggggaggcggggtcaggggagggccaggtggcg
ggagagggcggggttacggtgggaagtgtggggcctctgcaggaggaactaaaggcggca
cggttgcagattaatgagatgtcggggaaggttctaaagctgcagtatgagaaccgggtg
ctggtgtccaacgcgcagcgctgtgatctcgcctctcacctggggcagacacccggcgaa
ggacacacccacaccatcactgtggcaatcgcacgggaggaggaagaggaggatgatgaa
gaggcgggtcaggctctgcttctgcagcccaagcgtgagggtcccgtgggcggggaaagc
gactccgaggaggtggtggagcgctctgctacctccggattctgcagcagcagtggaggg
gtgggtctgaagccatgggaggcagatctgattggccagcgcaggagggcggaggagggg
cttaggcgggaagctgaacgtctgagccggagcgtggaccacctcatcgccgacaccgac
agtctcattcatgagggcgtcgtggtggtcaccgcggcaacggaaagttcaggagagtgc
gaatcgtcatcttcagctacagtggtggcggcaggcgaagccaagcaggacacggcggtg
ctggagacggtgagtgcgcgcatgaaggcattcagggcagagctccagggcttcatggag
aaggtagaacgtcttggcgacggccagcgagagcgcgaccgcggcgatgacctctcaccc
ctgccacacctcactgagtccagcagcttcctctccactggaacctccctgtcccgagac
tctcccatcggcactctgggaagggacctgcttgccgacctccagatccgagatccgtct
gcccctgagatcacctctccgggccgggagctccagttccgcttggaccgcttaagacct
agtcaggaggaccgtgaaggcctgaccggatcaatcactcagcaggaggcaaggcggggc
ctggagctacaaggtctacaaacgcacgaggtgccatggcctcaagagagggcgctgctg
cagcaggagctgcggctcttcagccaccacacggtcatcctctacatgaagctgcgctgg
attctcacccactggaggctcggacgcagggcagaggccggcgaggagggcgcccatgca
gagtatgaatgcctggagaacattcctgatctcagcgtcaccgtggagacggatgatggc
gagggggagattagaccctgcgccaaaatcaccgggggagtcggggaggtctccgaccct
ggactgctactagcctcaccggatctctaccagcaccaaaaacagcaggttggcgagaac
cggcgtgtgctgcatgcgttgcgttccctgctggaggagtttggctgtgaactgagagag
gaggagcagaggaggttgcagctacagcagacctatgccagcgagagagcatcatgggaa
atacagcgcgcagagatgagacgctgccttgcacagctggaggaggtggcaagctcgtca
ggaggaggtgcgggagcaggagcgtctgatcccctgaagcaggagcgtgaggagcaccgg
cgcctcctagcagagagccacggcgctgcactggagctgcgctggagactacaccacggg
gagagaagatggagccgcgagagacaggaactactggaacacttccacagagagagacag
acatggatgcagcgagagctggccctaccggaaggtaaggaggggggactccagcgtgtc
ttctccccccaggagagcccctgcaagccccctcggtccccgctctccccgcgctcccac
tcagactctgaggccacactggaggacaggggaccggccggccggctcaggccgctccat
actgcggagagccttttcctggacgcactctccctggacccccccagccaggcccaggtg
ccaccaccctctaggctcgagagcgagaagaggttcccctgcctgaaggaggcccttaat
gagatctctgaaagggcggagccagatgcgtactctgatgaggaaccgaccagtgggagc
ctcctccgggccaagtccgtttgctccatgagcgacttccagcgcctgatggatagctcc
cccttcctccccgacaaggcaagtcacctcggcgagcgcggtggtgggcgggaccgtggc
gaggtgactccgcccctctccccggacgacctcaagtacatcgaggagttcaacagtaaa
ggctgggagctggccaacgccctgagcgcctcctgccctattccaggccccctcaccctc
ctggggcagccgcctctgcagccccctctcactcccgctctggaggcttggggggatgcc
cggcggcccaccgaccccactgtcgacccatttcagccgggctcgtggttcctgaccacc
agcgccacgctcaccaccagcaccctgagcagcccagagcactgccagccggcaccggcc
caactgtcccccggagctgcggcggagcactttggtgtgcgggtgctgcacagccccacg
aggggcaaagacggaggcgggggcgtggcggaggagatgttcggaggggccaggtgggtg
agcggaggaggtgggggttacgcagcggcagcggcggcggcattggagctcaacctgagc
gacgacatgaaggaggtggccttctccgtgtgcaacgccatccgcccgccgcctcacgct
tcgctgcccgaccgacccctgcccgccctgcgcgactcggcttgccagaccagcggcttt
acctcgcggggcacacagacgtgccacgtggtgagtgtggggctccagacagacgccctg
cgggctctcaccagcagcccccaccgctgcctcacacccaaggggggcgggtccacaccc
gtctcctccccctcgcgcaccctccggcggccccagtacgtgccccccggacaggctaag
tttgagaggccctgctgctccccgaaatacggctccccgaaacttcagaggaagcccgcc
agcacgggcaagaccgagcccgtgggtggcggcgtgacagggggcgggggagggggtgcg
aattcgggtgcccctgggacgggagggtccagtagaacaccgacgccaacctccacgcct
cagaaagggaacagtgagtcggcgtgggcacgctccaccaccacgcgcgacagccctgtg
cacaccaccattaacgacggcctgtccagcctcttcaacatcatcgaccacacgcccctg
gccccggagcccgcgggggggaagttcacccgctcccccagcagggtcaaacctcaacag
gccactgcgggttgtgagagcacggtgccccctgctggatcggaccctaagtgcactgca
gggggtggagggggggcagttcaggagctccttaggggcggggtgccacgaggccgctcc
ccgagccctgtgcagcagctggtcatcatagagacgcagggcggggaggtgacaagcatt
cggcaggacctgtccgcgcccccagggcacacgctagcggagaatgcagctcggctgctc
aacaggaagctccaggagcagagcacccgcgaggacaggaggctgcaggtggtggctgtg
ggcccagtgcagggagctcatggcagggacggcagagccacagacactggggacaaggct
ggatgtttggaggacctgcctcgttctccagtagccccgcccctggaggcgtgtttccag
cgtcccgcccgtcctgccaaccgccggcccccatcccgttgggccgcgcgctcccctaac
tcttcccccacatggcgcagcgcagccactcaaaggttccgcttccccacccaaaccatc
cccgagctggaggaacctagtctggagccacaccctgcgtga
DBGET
integrated database retrieval system
