Clupea harengus (Atlantic herring): 105889428
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Entry
105889428 CDS
T09045
Symbol
asic1c
Name
(RefSeq) acid-sensing ion channel 1C isoform X1
KO
K04830
acid-sensing ion channel 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105889428 (asic1c)
Ion channels [BR:
char04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
105889428 (asic1c)
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Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
105889428
NCBI-ProteinID:
XP_031415121
Ensembl:
ENSCHAG00000010093
UniProt:
A0A6P8ES22
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Position
22:14552526..14647854
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AA seq
542 aa
AA seq
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MVLGIVSKETSERDLPNHGTGSRHARNTALKSTLKDVTAAFLTRTKVHGLKYVFSRDKSK
LCRTLWLLSIFVCIGLLCTWSWNRILYLLSFPVVTKLHMVWAYNMSFPAVTLCNENFFRV
SGLTQADLYHSGYWMDIMHQNHSVNRRSVAMLRLSSHHERLLRLLDFSDYSPPLPQHHFN
TTEMVSRLSHQLEDMLLECKFQGENCTYKNFTPIYTRYGKCYTFNSGLDGNPLLTTLKGG
TGNGLEIMLDIQQDEYLPVWGETDETSYEAGIKVQIHHQDEPPFIDQLGFGVPPGFQTFV
SCQQQLLQYLPPPWGDCKSTPIDSDYFTTYSITACRIDCETRYLLENCNCRMVHMPGTST
VCTPEQYKDCADPALDFLVEKDNDYCVCETPCNMTRYGKELSMVKIPSKASAKYLAKKFN
KTEQYIGENILVMDIFFEALNYEKIEQKKAYELAGLLGDIGGQMGLFIGASVLTILEIFD
YLYEVFKDKVLGYFMRKKRPQRCPSDNLSTCDTLRSHSDSLGFTSNMLPRHPTVGNFEEF
AC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtacttggcatagtgtcaaaagaaacaagtgagagggatctacccaatcatgggaca
ggctctcgccatgctagaaacacagctctgaagagcacccttaaagatgtcaccgcagcg
tttctgaccaggaccaaggtgcacgggctgaaatatgtcttttcacgggacaagtccaaa
ctgtgtcgcaccctgtggctcctttccatcttcgtgtgcatcgggctcctgtgcacctgg
tcgtggaaccgcatcctctacctgctctccttcccggtcgtcaccaagctccacatggtg
tgggcgtacaacatgagcttcccggcggtgaccctctgcaacgagaacttcttccgggtg
tcggggctcacccaggctgacctgtaccacagcggctactggatggacattatgcaccag
aaccactcggttaaccgcaggagcgtggccatgctgaggctcagcagccatcacgagcgt
ctcttgcgcctgctggacttctccgactacagcccgccactgccccagcaccacttcaac
accacggagatggtcagccgcctcagccaccagctggaggacatgctgctggagtgcaaa
ttccagggcgagaactgcacctacaagaacttcacccccatttatacaagatacggaaag
tgctacacgttcaactctggcttggacgggaaccccctgctcaccacgctgaaaggtggc
acgggcaacggactggagatcatgctggacatccagcaggatgagtacctccctgtctgg
ggtgaaacagacgaaacatcctacgaagcaggcatcaaggttcagatccaccaccaggat
gagccgcccttcatagaccagctgggatttggtgtgccccctggctttcaaacttttgtg
tcatgtcagcagcaactgctccagtacctccctcctccctggggagactgcaagtcaacc
cccatcgactctgactacttcaccacgtacagcatcaccgcctgtcgcatcgactgtgag
acgcgctacctgctggagaactgcaactgcaggatggtccacatgccaggaacttccact
gtttgcacaccagagcagtacaaagactgtgctgatcccgccttagatttcctggtagag
aaagacaatgactattgtgtgtgtgagactccctgcaacatgacccggtatggcaaagag
ctatccatggtgaaaatccccagcaaggcctcagccaagtatctggcaaagaaattcaac
aaaaccgaacagtacatcggggaaaacatactggttatggacatcttctttgaggctctg
aactatgagaagatcgaacaaaagaaagcatacgagctcgccggattactaggagacatt
gggggacagatgggcctgttcattggagctagcgtcttaacaatattggaaatctttgac
tacttatacgaggtgtttaaggataaggtactgggttatttcatgcgcaagaaaagaccg
cagcgctgtccgagcgacaatttgagcacctgtgacacactccggagtcactcggacagt
ctcggattcacgtcgaacatgctacctcgtcacccgactgtaggcaacttcgaggagttt
gcctgttga
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