Clupea harengus (Atlantic herring): 105889441
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Entry
105889441 CDS
T09045
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char00514
Other types of O-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105889441
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
105889441
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105889441
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
105889441
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
O-linked Gal type
105889441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
105889441
NCBI-ProteinID:
XP_042558970
Ensembl:
ENSCHAG00000016829
UniProt:
A0A8M1K8Z4
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All DBs
Position
22:complement(15278863..15288078)
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AA seq
474 aa
AA seq
DB search
MPLLTNVTFCVVAHESESHIVLQFADSDNLLTNPKVLTLLMAENKTLVAPMLESRTLYAN
FWCGMTPQGYYKRTPEYIPIRDWKRLGCHAVPMVHSTFLLDLRRNASRDLAFYPVHHLYP
WILDDIMVLSFSAKQAGVQMFVCNKEHYGYLPVPLKPDQNLEDEVESFSYIVSEALIKHT
LEPSHFLHTPLKQKDKMMFDEIYLINLRRRLDRRQRMLSTLDVLGLEATQTDAVDGKALN
TSQLLELGIDMLPNYKDPYSERVLTRGEIGCFLSHYNVWKQMVEKGQQQVLLLEDDVRFV
TRFKSRLITIMQDVKATGLDWDLIYVGRKRLQLKEPERWVEGVKNLVHPDYSYWTLGYAL
SLQGARKLLQAEPFGKMLPVDEFLPIMFDKHPREEYMAHFERRDLKAFSVEPLLLFPTHY
TGEPGYTSDTETSTIWDNENMSTDWDRESSQKNYAGTHPPVSSPPSSSSQQDEL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttttgacaaatgtgaccttttgtgttgttgcacatgaatcggaatcacacatt
gtcttgcagtttgcagacagtgacaatctgctgacaaatccaaaagtgctgacactgctt
atggctgagaataagactctggtggcacccatgctggagtcccgtactctttatgccaat
ttctggtgtggcatgacaccccagggttattataaacgcacccctgagtacatacccatc
agagactggaagcgtttgggatgtcatgccgttcccatggtgcactccactttcctgctg
gacctgcgtcgaaatgcgagcagagatctggccttctacccagtccatcacctctacccc
tggattctggatgatataatggtcttgtctttctcagctaagcaagcaggtgtgcagatg
tttgtgtgtaacaaagagcactacgggtaccttcctgtgcccctgaagcctgatcaaaac
ctggaggacgaagtggagagcttttcttacatagtctctgaggctttgattaagcatact
ttggaaccatcacatttcttgcataccccacttaagcagaaagacaaaatgatgtttgat
gagatctacctcatcaatctgagacgcagactggaccggaggcagagaatgttgagcacg
ctggatgttctgggccttgaggctacacagactgatgcagtggatggcaaagctctgaac
acttctcagttgctggaactgggcattgacatgctccccaattacaaagacccatattct
gaacgtgtcctgacaaggggagagattggatgtttcctcagtcattacaacgtctggaaa
cagatggtggagaaaggacagcagcaagtgcttctgctggaagatgatgtgagattcgtg
actcgcttcaagagccgcctgatcaccatcatgcaggacgtaaaggctactggtcttgac
tgggacctcatttacgtgggtcggaaacggttgcagttgaaggagcctgagcgctgggtg
gagggggtaaagaacctggtgcacccagactattcctactggaccctgggatacgccctc
tctctgcaaggagcccggaagcttctccaggcagagccatttggcaagatgctgccagtg
gatgagtttctgcccatcatgtttgataagcatcctagagaggagtacatggcccacttt
gagcgcagagatcttaaggccttctccgtggagcctctgttgcttttccccacgcattac
acgggcgagccaggctacaccagtgacacagagacctccaccatctgggacaatgagaac
atgagcactgactgggaccgggagagttcccaaaagaactacgccggcacacaccctcct
gtctcaagcccacccagcagcagcagtcagcaggatgaactgtga
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