Clupea harengus (Atlantic herring): 105889464
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Entry
105889464 CDS
T09045
Symbol
skila
Name
(RefSeq) ski-like protein isoform X1
KO
K18499
Ski-like protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105889464 (skila)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
DUF489
Motif
Other DBs
NCBI-GeneID:
105889464
NCBI-ProteinID:
XP_012670757
Ensembl:
ENSCHAG00000019389
UniProt:
A0A6P3VFG3
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Position
22:complement(15526660..15561219)
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AA seq
737 aa
AA seq
DB search
MNLCLTMASTQTSLNTPFKDLTSLKGNTKRLYRERQDYAPIKKRVMAEMNLKRRSQESLP
CGPKVKNEHVDMELLGAELDAEGMDIHGGGGVAKALDLSPGLKHTLAQFTLSSQSSLGGP
AAFSAKTGQEASSTAHLNPMPSPPILGGGPLLVPCDSSTELTHSLLEGESISCFAVGGEK
RLCLPQVLNSVLRDFSLQQINAVCDELYVYCSRCDAEQLHILKVLGILPFNVPSCGLITL
TDAQRLCNALLRPGTALPPELGAKLSAQGLLRESGDAFQVEHQCLGKCQGLFVPQFYVAP
NAPCVQCVECQLLFSPQNFVMHSHKSSDKRTCHWGFDSAKWPCYLLLARKYLGSADEPRL
KQLLEQMKEKFHYQPKLLLDKAADEDSHMVATPNHCSSNAKLSDNELIRKGKGHTGTVFS
HLFPDIKEEPGHDTTIHPSYYLYPYDKMLPPNVSLRNEAEVSQEVLGALLKQHYSHHRQD
TPPMDLHSSPSATTPSDEAESQRAAERQAVPAAAVAVATAGKNAHAHTLAAADVAAVGKD
GSVAEDDKDRIVLEIVQMYSRQQERLNDTLHKQLQLEMELEALRGGSAARLRELSVERSE
LQTELEAVHTEHAQRLGEVRQEQRELETRLEQLRQQSCACEPNTHAQQEAHYTAQLSKLR
ARLERAEAERVELQEELQREREARERLELTIAQLQQQMSHATTTTTVSPSHTPRPLNTPT
PTEASPAPSQAPELTSS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtgtttgaccatggccagtactcagacgagtttgaacaccccctttaaagac
ctgacctccctaaaggggaacacgaagcggctgtacagggagcggcaggactacgcgccc
atcaagaagcgtgtgatggctgagatgaacctgaagcggcgcagccaggagagcctgccc
tgtgggcccaaggtgaagaacgagcatgtggacatggagctcctgggggccgagctggat
gcagagggcatggatatccacggtggtggcggtgtggccaaggctctggatctaagcccc
ggcctcaagcacacgctggcccagtttacccttagcagccagagttcactagggggccct
gccgccttctccgccaagacgggccaggaagcatccagcacagctcacctgaaccccatg
ccctccccgccgatcctgggtggcgggccactcctggtgccctgcgacagctccactgag
ctcacccactcgctgctggagggcgagtccatctcctgtttcgcggtgggcggggagaag
cggttgtgcttgcctcaggtgctaaactctgtgctgcgtgacttctcgctgcagcagatc
aacgccgtgtgcgacgagctctatgtgtactgctcgcgctgcgatgccgagcagctgcac
atcctcaaggtgctgggcatcctacccttcaacgtgccctcctgcggcctcatcaccctc
accgatgctcagcgcctctgtaacgccttgctgcgtcccggtactgccctgccccccgag
ctcggtgccaagctgtctgcccaaggtctgctgagggagagcggggacgccttccaggtg
gagcaccagtgcctgggcaagtgccagggcctgtttgtgccgcagttctacgtggcgccc
aacgcgccatgcgtccagtgcgtggagtgccagctgctcttctcgccgcagaacttcgtc
atgcactcgcacaagtcatcggacaagcgcacgtgccactggggcttcgactcagccaag
tggccctgctacctgctgctcgcccgcaagtacctgggctctgctgacgagccgcgtctc
aagcagctgctggagcagatgaaggagaagttccactaccaacccaaactccttctagac
aaagctgcggatgaagatagccatatggtggccacccctaaccactgctcctccaatgct
aagctttctgataacgagctcattagaaaggggaaaggccacactggcacggtgttcagc
catctgttccctgacatcaaagaggagcctggacacgacaccaccatccacccaagttac
tacctgtacccatacgataagatgctgccgcccaatgtgtctctgaggaatgaggcggag
gtcagtcaggaggtgctcggggcgctgctcaaacagcactacagccatcacagacaggac
accccacccatggatctgcactcctccccgtctgccacaaccccctcagacgaggccgag
tcccagcgcgccgccgagcggcaggctgttccggctgccgcggttgccgtggcaactgcc
ggtaagaacgcccacgcgcatacactggcggcggcggacgtggcagcggtgggcaaggat
ggcagcgtcgccgaggacgacaaggaccgcatcgtgctggagattgtgcagatgtacagt
cggcagcaggagaggctcaacgacacgctgcacaagcagctacagctggaaatggagctc
gaggctctgcggggaggctctgcggcccgtctgcgggagctgagcgtagagcgcagcgag
ctgcagacagagctggaggcggtgcacactgagcatgcccagaggctgggcgaggtgcgg
caggagcagcgggagctggagacgcggctagagcagctccggcagcagagctgcgcctgc
gagcccaacacacacgcacagcaggaggcccactacaccgcgcagctgtctaagctgcgt
gcacgtctggagcgggcagaggcggaacgcgtggagctgcaggaggagctgcagagggag
cgggaggctcgggagcgcctggagctcaccatcgcccaactccagcagcagatgtcccat
gccaccaccaccaccacagtcagccccagccacactccccgtcccttaaacacccccacc
cccacagaggcctcccctgccccatcacaggcccctgagctcacctccagctag
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