Clupea harengus (Atlantic herring): 105889468
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Entry
105889468 CDS
T09045
Symbol
slc1a8b
Name
(RefSeq) solute carrier family 1 member 8b
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105889468 (slc1a8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105889468 (slc1a8b)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
105889468 (slc1a8b)
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
105889468
NCBI-ProteinID:
XP_012670761
Ensembl:
ENSCHAG00000017511
UniProt:
A0A6P3VFN1
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Position
22:15406737..15412730
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AA seq
571 aa
AA seq
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MMMEGQGGRAKATYSGSHSPPKSLWRRMLEGVKRVLRRVVSLKIRVWISDYCKHNGLLTL
SVLAVVSGCVIGYMLRSFNLSSQAKIYFSFPGELLMRMLKMLILPLITSSLMSGLASMDT
KASGRMGLLTITYYLWTTFIAVIVGIVLVLIIHPGDGTEKEGHTGTSGPVMTSADALLDL
IRNMIPSNLIEATFQQYKTDLVPLVKSSAKESQANYVYIMPDYDNPKMGHPVFLEITPAP
EIKYKVVPGSSKQMNVLGIVIFSVTMGLLLGKMGERGLPLVNVCQCINECVMKIINAAMW
YFPFGIIFLVAGKILDMHDPIHLAEKLGMYFITVLLGLFVHGVILLPLFFYILTKKNPFS
YIRGLLQALVIALATSSSSATLPITMKCLLENCHVDRQIARFVLPVGATINMDGTALYEA
VAAIFIAQVNEYELDFGQLVTISITATAASIGAAGIPQAGLVTMVIVLTSVGLPPDDISL
IVAIDWILDRFRTMINVLGDALAAGIMAHICRKDFPKKSERRGTAISYGTQSVLSVPLYD
VPLISNKDYIFEVAGDTVTERPPTFYNLCQV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggagggacaagggggtcgtgccaaggcaacttattcaggcagtcattctccg
ccgaagagcctttggagaaggatgctggagggggtaaagcgcgtccttcgcagggtagtg
tctttgaaaatccgagtatggataagcgactactgcaaacacaacggcctgctgacgctc
tcggtcctggctgtggtgtctggatgtgtcattggatacatgctgaggagcttcaatttg
tcctctcaggcaaaaatctacttctccttcccgggagagctcttgatgagaatgctgaag
atgcttattcttcctctgatcacatccagtcttatgtctggcttggcatcgatggacacc
aaggccagtgggcgcatgggccttcttacaataacatactacttgtggactaccttcatc
gcggtcatagtggggattgtgttggttctcatcatacaccctggtgacggaacagagaaa
gaagggcatactggaaccagcgggcctgttatgacctcagctgacgctctcctcgatctc
atcaggaatatgattccctcaaatctgattgaagcaacatttcagcagtacaagacagat
ctcgtgcctttggttaaaagttcagcaaaggagtcccaggccaactacgtttacatcatg
cccgactacgataaccccaaaatgggccacccagtgttcctggagataacccctgccccg
gagatcaagtacaaggtggtcccggggagcagcaaacagatgaatgtgcttggcatcgtc
atattctccgtcactatgggtctcctactgggaaagatgggagagaggggtttgcctctg
gtcaacgtgtgtcagtgcattaacgagtgtgtcatgaagatcatcaatgcagccatgtgg
tatttcccatttggtatcatatttctggtggctggaaagatcctggacatgcatgacccc
attcacctggctgagaaactaggcatgtatttcatcactgtcttattgggcttgtttgtg
catggagtcattctgctccccctcttcttctacattctgaccaagaagaatcccttcagc
tacatccgaggcctccttcaggctctggtcatcgccctggcgacatcatccagctcagct
actcttcccattactatgaagtgcttgctggagaactgccatgtcgatcgtcagattgct
cgatttgtgctgcctgttggtgccaccattaacatggacggcacagcactctatgaggcc
gtggctgccatcttcatcgctcaagtcaacgagtatgagctggactttggacaactcgtc
accatcagcataacagcaacagctgcaagcatcggtgctgcagggatcccccaggctggc
ctggtcaccatggtcattgtcctgacttcagttgggcttccacctgacgacatctcactc
atcgtggccattgattggatcctagatcgcttcaggaccatgatcaatgtccttggagat
gccttggcagcaggcattatggcccatatatgcaggaaagacttcccaaagaaaagcgag
aggcgtggcactgcgatatcctatggaacccagagcgtcctgagcgtgcccttatatgat
gttccactgatatccaacaaggattacatctttgaggtggctggagacactgtgacggag
agacctcctaccttctacaatctctgccaggtctaa
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