Clupea harengus (Atlantic herring): 105889469
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Entry
105889469 CDS
T09045
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105889469 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
105889469
NCBI-ProteinID:
XP_031415855
Ensembl:
ENSCHAG00000021666
UniProt:
A0A6P8EVB6
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Position
22:complement(13497986..13507724)
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AA seq
703 aa
AA seq
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MGPGYAKWIITVVFCWLVQIASSNSVEQKIYVELNNTVPCVRLLNATHQMGCQSSISGNT
GVLHMLETESDLDIILNTGPHPPYMVLMDAAFFNSNTMMRMKNSTRVAGVAVVISNSGPP
QGFSPHNKCPNQNTGVYSDTYGPRLADCNGTVWNPLGNGLSFEDFKFPIFSMKDDNQTEV
IRKCILDHNMGVNGSVPTYPLCAIQLFSHMHAVTSTATCMRRNDIQNNYSLNPETFCDPL
GDYNVWAPLRPINFTDKGHKANESVVVAATRLDGRSFFWDIATGAEGTVAGFVTLLAASQ
ALKPTAQQAPPPRNILFTFFQGEAFDYIGSSRMVYDMENKNFVIDLDNVHSVLEIGQVGL
RRGTDLYMHTDPISRRNNSSVNEEVEILFSNMSSVAAGLGLTLAQPTVTQPLPPSSFQRF
LRARSIPGVVLADHQSAFNNKYYESVYDNAAYLNASYPPDLTPEEQLEHVTDAALALADV
ATLVARSLYLQAGGEESQIPNITADPKIVTQLLYGFLIQSNNSYFRSLTNPEDNSLLESQ
APQYYVGVPITSSTIKRSTRMVQYLLANYTGNPTSLNQSKCQDPSGLPGESKELYTYLWV
RGSNGSESSPYCCRSTVRRTKAISPAFDLDLKQYDSQIYSTWTESRWKLIRARIFLVASH
DLEMLTLGVGIAVLLLSLLITYFLSSKAELLFAPAQESPGTAY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgggccccggttatgctaaatggattataacagtggtattttgctggctcgttcaaatt
gcaagcagtaactcggtggagcagaagatctatgtagagttgaataacacggtgccatgc
gttcgcctgctcaacgcgactcatcagatgggttgccagtcctctatatcagggaacact
ggggttctccatatgctggagacggagtcagacttggatataatactgaacacaggcccc
caccccccctacatggtactcatggatgctgcgttcttcaacagcaacaccatgatgcgg
atgaagaactctacccgagtggcaggagttgcagtggtgatctccaactctggccctccc
caggggttctccccacacaacaaatgccccaatcagaacacaggcgtgtactcagacacc
tatggtcctcggctggcggactgtaatgggactgtgtggaatcctctgggtaatgggttg
tccttcgaggacttcaagttccccatattctccatgaaggacgacaaccagactgaagtc
atccgtaagtgtattttggaccataacatgggcgtgaatggtagtgtgccgacgtacccc
ctgtgtgccatccagctcttctcccacatgcacgctgtcaccagcacagccacctgtatg
agacgtaacgacatccagaacaactacagccttaacccagagaccttctgtgatcccctg
ggggattacaatgtttgggctcctctccgcccaatcaatttcacagacaagggacacaag
gccaatgagagtgtggtagttgcagcaaccaggctggatggcaggtcgtttttctgggac
attgccacgggggcagaggggactgtcgccggattcgtcaccctgttggccgcatcccaa
gcattgaaacctacggcccagcaagccccaccccctcgcaacatcctcttcaccttcttc
caaggggaggcctttgactacatcggtagctccagaatggtgtatgacatggagaataag
aattttgtgatcgacttggacaacgtccactcagttctggagataggacaggtggggctg
cggagaggtacagacctgtatatgcacactgaccccatctcgcggaggaacaacagcagc
gtcaacgaggaggtggagattttgttcagcaatatgtcttcggttgctgcagggcttggc
ctcacgctggctcagcccactgtcactcagcccctcccgccctcctccttccagcgcttc
ctccgagctcggtcaatcccaggcgtagtcttggcagaccaccaatcggctttcaacaac
aagtactatgagagtgtgtatgataatgccgcctacctgaacgccagctacccacctgac
ctcaccccagaggagcagctagagcacgtcacagacgccgctctggcgttggcagacgtg
gcaacactggtggctcgttctctctatcttcaggcaggaggggaggagtctcagatcccg
aacatcaccgctgacccgaagatagtgacccagttgttgtatgggtttctgatccagtct
aataacagctactttaggtctctgaccaaccctgaggataactcacttctggagtctcag
gctccacagtactatgtgggagtacccattacttccagcaccattaagcgctccacacgt
atggtgcagtacctactggctaactacacgggcaaccccaccagcctcaaccagtccaag
tgccaggacccctcaggcctgcctggggagagcaaggagctctacacttacctgtgggtg
cggggctccaatggctcggagtcatccccgtactgctgtcgctcgacggtgcggaggaca
aaagccatctcgccggcctttgacctcgacctcaagcagtacgattcccaaatctactcc
acatggaccgagtcccgctggaagctcatccgcgcccgcatcttcctggtggccagtcac
gacctcgagatgctgaccctgggagtggggatcgccgtgttgctgctctccctcctaatc
acctacttcctaagcagtaaggcggagcttctgtttgcccccgcccaggaatccccaggc
accgcctactga
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