Clupea harengus (Atlantic herring): 105889491
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Entry
105889491 CDS
T09045
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889491 (fubp1)
03041 Spliceosome [BR:
char03041
]
105889491 (fubp1)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105889491 (fubp1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105889491 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105889491
NCBI-ProteinID:
XP_012670790
Ensembl:
ENSCHAG00000010859
UniProt:
A0A6P3VGI3
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All DBs
Position
22:14700703..14711713
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AA seq
693 aa
AA seq
DB search
MADYSNVAPPSSNNGGGMNDAFKDALQRARQIAAKIGGDGVAPPPSANDFGYGGQKRPLE
DADQPEAKKVAPNDPFNAVMGGMGGGPSRSISEEFKVPDGMVGFIIGRGGEQISRLQQES
GCKIQIAPDSGGMPERSVTLTGGPESIQAAKRLLTEIVEKGRPTPFHHNDGPGMTVQEIL
VPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKEMV
MELIRDQGFREQRGEYGSRMGGGGGGGGGGGGGGGGGGGGGGGGHGGNGGNGNGGNGDGG
DSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPERIAQIMGPPDRAQHA
AEIISDLLRSVQAGGPPGPGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGE
TIKGISQQSGARIELQRNPPPNADPSIKVFTVRGTHQQIDYARQLVEEKIGGPVSPMGGP
HGPPGPHGGPAPHGPPGPPGPPAPMGPYNPGPYNQGPPGPHGGPPGPYPPQGWGNGYPGH
WQQGQQDPNKAAADANAAAWAAYYAQYQQQPQTPMTPTSTAPGTAQTNGQGDPQAPGQSG
QADYTKAWEEYYKKSGQQGQPAQDYTKAWEEYYKKQGQAAPQAAAATPTPAAQPGGQPDY
SAAWAEYYRQQAAYYGQAGAQGMGAAPQAPQGQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagattattccaacgtggctccaccgtcctcaaacaacggaggaggaatgaacgac
gcctttaaggatgcactacagcgggcaagacaaattgctgctaaaatagggggcgatggc
gttgcccctcctccttcggcaaatgactttgggtatggggggcagaaacggcctttggaa
gacgctgatcaaccagaagcaaagaaggttgcccctaatgaccctttcaatgcggtcatg
ggtgggatgggcggaggtccctcaagatctatttcggaggagttcaaagttccagacggc
atggttggatttatcatcggaagaggaggagagcagatatcccggttgcagcaggagtca
ggatgtaaaatacaaatcgccccagacagtggaggaatgccagagaggtcggtgacatta
acaggaggtccagaatccatccaggctgcgaagaggttattaacagagattgtggagaag
ggcaggcccacaccattccaccataatgatggcccaggcatgactgtgcaggagattctc
gtccctgcctctaaagctggccttgttatcggcaagggtggagaaaccattaaacagtta
caggaacgcgctggtgtgaagatggtaatgatccaggacgggccgcaaaacacaggagca
gacaaacctctccggatttcaggagaaccttttaaagttcaacaagccaaagagatggtc
atggaactgattagagatcaaggtttccgggagcaacgcggcgaatatggctcaaggatg
ggaggaggaggaggaggcggcggtggtggtggtggtggtggtggaggaggaggaggagga
ggaggtggcggccacggtggcaatggtggaaatggcaatggtggcaatggtgacggtggt
gacagtctggatgttccagtgccacggtttgcagttggaatcgtgattggacggaatggt
gaaatgattaagaaaatccaaaatgacactggagtgcgaattcagttcaaaccagatgat
ggcactacacccgagaggatagcccagatcatggggccgcctgaccgagcacagcatgcg
gccgagatcatctctgacctactgaggagcgtgcaggctggaggacctccaggacctggg
ggcaggggcagaggtcgtggccagggcaactggaatatgggcccacctggaggcctgcag
gagttcaccttcaccgtccccactatgaaaactggcctcatcatcgggaaagggggtgag
accattaaaggcatcagccagcagtcgggggccagaatagagctgcagaggaacccccct
cccaatgccgaccccagcatcaaggttttcactgtccgagggacgcaccaacagatcgac
tacgcccgacagctggtggaagagaagatcggaggtccagtcagtccaatgggtggtcct
catggaccgccgggccctcacggaggacctgcccctcatggccctccagggccccctgga
ccccctgcaccaatgggaccctacaaccccgggccctacaaccagggccccccaggacct
catggtggtcctcctggcccctacccaccccagggctggggcaatgggtacccagggcac
tggcaacagggacagcaagatcccaataaagcagcagcggacgccaatgcagcggcgtgg
gcggcttattatgcccagtaccagcagcagcctcagacacccatgacgcccaccagcact
gcaccaggcacagcacagaccaacgggcaaggtgacccgcaggctccaggtcagagtgga
caggcagattacaccaaggcctgggaggaatattacaagaaatcgggtcaacaaggccag
cctgcacaggactacacaaaggcctgggaagagtactacaaaaaacaaggtcaggccgcc
cctcaggcagcggcggccacgccaacgcctgccgcccagcccggaggccagccggactac
agtgcagcctgggctgagtactaccgccagcaagctgcctactatggccaggctggagcc
cagggcatgggagcagctccacaggccccgcagggccagtaa
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