KEGG   Clupea harengus (Atlantic herring): 105889513
Entry
105889513         CDS       T09045                                 
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
  KO
K13088  ELAV-like protein 1
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105889513 (elavl1a)
   03041 Spliceosome [BR:char03041]
    105889513 (elavl1a)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     105889513 (elavl1a)
   mRNA cycle factors
    Stress granule specific factors
     105889513 (elavl1a)
Spliceosome [BR:char03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    105889513 (elavl1a)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 BRAP2 RRM_7 RRM_3 YqeY
Other DBs
NCBI-GeneID: 105889513
NCBI-ProteinID: XP_012670822
Ensembl: ENSCHAG00000017982
UniProt: A0A6P3VFR8
LinkDB
Position
22:complement(15415976..15426688)
AA seq 339 aa
MAVRRGHIRYLKEVHDMSNGYEDHMADDKDARTNLIVNYLPQNMTQDELRSLFSSIGEVE
SAKLIRDKVAGHSLGYGFVNYLNPSDAERAINTLNGLRLQSKTIKVSYARPSSDTIKDAN
LYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQGTGMSRGVAFIRFDKRAEAEDAIKDL
NGQKPPGATEPITVKFAANPNQAKNSQIISQIYHAQSRRFGGPVHHQAQRFRFSPMSVDH
MSSISGVNVPGNSTSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGF
GFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcagtcagaaggggacacattagatacttaaaagaggtgcatgacatgtctaacggt
tacgaagatcacatggctgatgacaaagatgccagaacaaaccttattgtcaattacctg
ccccagaacatgacccaagatgaattgcgcagtctcttcagcagtattggggaggtagag
tctgctaagctcatccgtgataaagtggcaggccacagtttagggtacggatttgttaac
tatcttaaccctagtgatgcagaaagggcaatcaatacactcaatgggctgagactacag
tctaaaactatcaaggtgtcttatgccagacccagctcagacactataaaggatgccaac
ctgtacattagtgggctgcccaaaaccatgacgcagaaagatgtggaagacatgtttgca
cgctatggtcgaatcattaactcgcgtgtcctggtagaccagggaacaggtatgtcacgg
ggtgtggcgttcattcgctttgataagagggcagaggctgaagatgcaattaaggacttg
aatgggcagaaaccacctggtgccacagagcccatcacagtgaagttcgccgcaaacccc
aaccaggcgaagaactcccagatcatctcgcagatctaccacgcacagtcccggcgcttt
ggagggcctgtacaccaccaggcccagaggttcaggttctcccccatgagtgtggaccac
atgagcagtatctctggcgtgaatgtcccagggaactccacctcgggctggtgcatcttc
atctacaacctgggccaggacgcagacgagggcattctgtggcagatgttcggtccattt
ggagcggtcaccaacgtcaaagtcatccgagacttcaacaccaataaatgcaaagggttt
ggctttgtgaccatgacaaactacgaagaggcagcaatggccattgctagcctcaacggt
tatcgccttggggacaaaatcttacaggtgtcttttaaaaccaacaagtctcacaagtaa

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