Clupea harengus (Atlantic herring): 105889513
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Entry
105889513 CDS
T09045
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889513 (elavl1a)
03041 Spliceosome [BR:
char03041
]
105889513 (elavl1a)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105889513 (elavl1a)
mRNA cycle factors
Stress granule specific factors
105889513 (elavl1a)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
General mRNP proteins
105889513 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_7
RRM_3
YqeY
Motif
Other DBs
NCBI-GeneID:
105889513
NCBI-ProteinID:
XP_012670822
Ensembl:
ENSCHAG00000017982
UniProt:
A0A6P3VFR8
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Position
22:complement(15415976..15426688)
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AA seq
339 aa
AA seq
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MAVRRGHIRYLKEVHDMSNGYEDHMADDKDARTNLIVNYLPQNMTQDELRSLFSSIGEVE
SAKLIRDKVAGHSLGYGFVNYLNPSDAERAINTLNGLRLQSKTIKVSYARPSSDTIKDAN
LYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQGTGMSRGVAFIRFDKRAEAEDAIKDL
NGQKPPGATEPITVKFAANPNQAKNSQIISQIYHAQSRRFGGPVHHQAQRFRFSPMSVDH
MSSISGVNVPGNSTSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGF
GFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacattagatacttaaaagaggtgcatgacatgtctaacggt
tacgaagatcacatggctgatgacaaagatgccagaacaaaccttattgtcaattacctg
ccccagaacatgacccaagatgaattgcgcagtctcttcagcagtattggggaggtagag
tctgctaagctcatccgtgataaagtggcaggccacagtttagggtacggatttgttaac
tatcttaaccctagtgatgcagaaagggcaatcaatacactcaatgggctgagactacag
tctaaaactatcaaggtgtcttatgccagacccagctcagacactataaaggatgccaac
ctgtacattagtgggctgcccaaaaccatgacgcagaaagatgtggaagacatgtttgca
cgctatggtcgaatcattaactcgcgtgtcctggtagaccagggaacaggtatgtcacgg
ggtgtggcgttcattcgctttgataagagggcagaggctgaagatgcaattaaggacttg
aatgggcagaaaccacctggtgccacagagcccatcacagtgaagttcgccgcaaacccc
aaccaggcgaagaactcccagatcatctcgcagatctaccacgcacagtcccggcgcttt
ggagggcctgtacaccaccaggcccagaggttcaggttctcccccatgagtgtggaccac
atgagcagtatctctggcgtgaatgtcccagggaactccacctcgggctggtgcatcttc
atctacaacctgggccaggacgcagacgagggcattctgtggcagatgttcggtccattt
ggagcggtcaccaacgtcaaagtcatccgagacttcaacaccaataaatgcaaagggttt
ggctttgtgaccatgacaaactacgaagaggcagcaatggccattgctagcctcaacggt
tatcgccttggggacaaaatcttacaggtgtcttttaaaaccaacaagtctcacaagtaa
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