Clupea harengus (Atlantic herring): 105889538
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Entry
105889538 CDS
T09045
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889538 (fubp3)
03041 Spliceosome [BR:
char03041
]
105889538 (fubp3)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105889538 (fubp3)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105889538 (fubp3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
FUBP_C
CG7065_mid
DUF2990
Motif
Other DBs
NCBI-GeneID:
105889538
NCBI-ProteinID:
XP_012670869
Ensembl:
ENSCHAG00000010803
UniProt:
A0A6P3VGF5
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All DBs
Position
12:complement(14643932..14675381)
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AA seq
598 aa
AA seq
DB search
MMMMAELVQGQASVAQPGMKADGFADALHRARQIAAKMGGDQMPHLNNSSPVVDPSLYGY
GGQKRTMDEGVGSQLGGMVHQRAIITEDYKVPDKMVGFIIGRGGEQITRIQLESGCKIQI
AADSGGMMDRPCTLTGSPESIEQAKRLLGQIVERCRNGPGFHNDMDGNNTIQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMIMIQDGPMPTGVDKPLRITGDPYKVQQARELVVEIIR
DKDQGDFRTARGDFGSRMGGSSMDCDSSQVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQ
FKPDDGISPDRIAQVMGQPDRCQHAVHLINELVHTAQRSPFPPQTGWSLDGSSLTPDRPV
LDPLGPWPGLGDLSQLYGQERDGFGGAARGRGRGRGDWNVGAPGGIQEVTYTIPADKCGL
VIGKGGETIKNINQQSGAHVELQRNPPPNTDPNMRIFSIRGTPQQMEVARQLIDEKIGAS
GLGGNSSFGLNPFTQGPATPHQNGPQTFMTGGWGTTYQPWQPQGQQDPSQQSQAQSSGPD
YSKAWEEYYKKQTQAAVSGSQQSSPPDYSAAWVEYYRQQGAYYGQGAQQTQAPGLQDH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggtgcagggacaggcctcggtggctcagcctggaatgaaa
gcagacggcttcgccgacgctttacaccgggcccgacagattgcggctaagatgggggga
gaccagatgccccatctgaacaattcctctccggttgtggacccctcactctatggctat
ggaggccagaagcgcaccatggacgaaggagttggcagccagctgggtggaatggtacat
caaagggctattatcacagaagactacaaagtgcctgataaaatggttggattcattatt
gggagaggaggggaacagatcacaaggattcagttggaatccggttgcaagatacagatt
gctgctgatagtgggggtatgatggacagaccctgcaccctcactggaagccctgaaagc
attgagcaggcgaagcgactgttggggcagatcgtggagcgatgtcggaacgggccgggc
ttccacaacgacatggacggcaacaacaccatccaggagatccttatccccgccagcaaa
gtgggcctggtcatcgggaaaggaggggacaccatcaaacagctgcaggagagaacaggt
gttaagatgatcatgatccaagatggtcccatgccgacaggagtggacaagcccctgaga
atcactggggacccttacaaagtgcagcaagcccgtgagctggtggtggagatcatccgg
gataaggaccagggagacttccgcactgccagaggggactttggctccaggatgggagga
agcagcatggattgtgactcttcccaggtggctgtcccgaggtttgccgtggggatagtc
attggcaggaacggggagatgatcaagaagatccagaacgacgccggcgtgaggatccag
ttcaagccagatgatggcatcagccccgaccgtatcgcccaggtgatgggccagccggac
agatgccagcacgcagtccacctcatcaacgagctggtccacactgcacagcgatccccc
ttcccgccccaaaccggctggtccctggatgggtccagcctgaccccagaccgacccgtc
ctggacccgctgggcccctggcccggtttgggggacctcagtcagttgtatggacaggag
cgggacggattcgggggtgcagcccggggccgtggcagaggacgcggggactggaacgtc
ggggcacctggaggcattcaggaagtgacctacacgatacccgctgacaagtgtggcctt
gtgattgggaaaggtggggagaccatcaagaacatcaaccagcagtcaggagcccatgta
gagctgcagagaaacccgccgcccaacaccgaccccaacatgcgcatcttctccatccgt
ggcacccctcagcagatggaggtggctcggcagttgatcgatgagaagatcggggcgtca
gggctgggaggcaacagcagttttggcctcaatcctttcacccaaggcccagccacccct
caccagaatggaccgcagaccttcatgactggaggctggggcacaacctaccaaccatgg
cagccccagggacaacaggaccccagtcagcagagccaagcccagagcagcggccctgac
tacagcaaagcatgggaggagtactacaagaaacagacccaggctgcagtgtccgggtcc
cagcagagttctcctccagactacagtgctgcctgggtggagtactacagacagcagggg
gcctattacggccagggtgcacagcagacacaggctccgggccttcaggatcattag
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integrated database retrieval system
