Clupea harengus (Atlantic herring): 105889542
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Entry
105889542 CDS
T09045
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
105889542
Pattern recognition receptors [BR:
char04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
105889542
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
RALGAPB_N
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
105889542
NCBI-ProteinID:
XP_042559861
UniProt:
A0A8M1K7B1
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Position
26:11427778..11448887
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AA seq
1108 aa
AA seq
DB search
MNQDVEEAAGHSKTLRPESALHSCVTMKNDQDMDDPGNMSSTSTQPNAGRHTHRPQSPAP
SCVSMKSDQSMPQPLNFSSQPVPSGLKQHTPRPKSPAPSCVSMKSDQSMPQPLNFSSQPV
PSILNELSADLTQDQSRCGECERVPSDPVITTCGHYWEQPALPGHQTCPQCVKKYRTHPP
LQPLLDEHADMVESSRHLHTEHRPGKRSKLADEVPWRVIEKHKASLKRRFENISEGIIKP
GAETPLNKIYTDLYITEGESEGVNKEHEVWQVESASRAQTTEDTPINCNDIFQPLPGQEK
HIRTVMTKGVAGIGKTVSVQKFILDWINGVANQNVDFMFPLPFRELNLVRDDQYSLHKLL
LDFHPELKELKNGKEYRDCQIVFIFDGLDESRSLLHFQPKMLVSDVEQISSVDVLMTSLI
QGSLLPAALIWITSRPAATSQIPAQCIDQVTEVRGFNDPQKEEYFRKRISDESQATRIIS
HIKASRSLHIMCHIPVFCWIAATVLQQMLEQDNTQEVPQSLTEMFIQFLLIQITRKNQKY
QTGKQTNKEQLLESQEEIILKLAKLAFENLVNGNVMFYEEDLRECGIDVSEASVYSGMCT
EIFKEESVFHQRKVYCFVHLSIQEFLAALHVFVSYVQQMQTIGNFFCLEESLKLAVTKVL
ESRNGHLDLFLRFLMGISLERNQRLLEGLLNHTHNSSESIRKMCQYIKELNKEDLSPERC
ISLLQCLSEMNDHAMHEEIQEYLKLPKGFRQKLSPAHCSTLAHMLLMSEEVREEFDLKTY
NTSDEGRRRMIPALRCFRTAKLGDCKLSGESCKIVACVLHSVNSLIELDLSHNDLGDSGV
QLLCEGLASPHCHLQILRLSCSLISEGGCGFLASALTSNPSHLKELDLSYNHPGESGFKL
FSARLEDPHCKLEILNVDHCAEIRLRPGVQKYPCELTLDPNTAYIRLSLSEGNRKVTCGN
EDQRHPDHPERFDSWPQVLCKEGLTGRCYWEAEWSGGAAHIAVAYKSIKRKGKSDDCCLG
YNDKSWSLYCSPDSYYVWHNNVRTDIPDPSSRSSTVGVYLDWPAGTLSFYSVSADTLTHL
HAFHSTFTEPLYPGFGVHDDSSVSLCQI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagacgtagaggaggctgcaggtcacagtaagacactcagaccagagtctgca
ctacacagctgtgtgaccatgaagaatgaccaggacatggatgatcctggaaacatgagt
agcacatcaacacagcccaatgcaggacgacacacacacagacctcaatctccagcgccc
agctgtgtgtctatgaagagtgaccagtccatgcctcagcctcttaacttcagcagtcaa
ccagttccatctggtctaaaacaacacacacccaggcctaaatctccagcgcccagctgt
gtgtctatgaagagtgaccagtccatgcctcagcctcttaacttcagcagtcaaccagtt
ccatcaattctgaatgaattgagtgctgatctgacccaggatcagtccaggtgtggagaa
tgtgagagggtaccgagtgacccagtcatcaccacctgtggacactactgggagcagcct
gcactgccaggacaccaaacctgtccccagtgtgtaaagaaatacagaactcatcctcct
ctacagcctcttctggatgaacacgcagacatggtagaaagcagcagacacctgcacact
gaacacagaccaggcaaaagaagtaaactagctgatgaagtcccgtggagagttatagag
aagcataaagccagtctgaagaggaggtttgaaaacatatctgaaggcatcatcaaacca
ggagctgagacacccctcaataagatctacacagatctctacatcacagagggagagagt
gaaggggtgaataaggaacatgaggtgtggcaggtagagtcagcatccagagcacaaacc
acagaagacacaccaatcaactgcaatgacatcttccagcccttacctggacaagagaag
cacatcagaactgtgatgaccaaaggtgttgctggcattggaaaaaccgtctcagtgcag
aagttcatccttgattggataaatggggtagccaatcagaatgtagactttatgtttcct
cttccttttcgtgagctgaatttagtgagggatgatcagtatagtcttcacaagctcctg
cttgacttccaccctgagctgaaggagctgaagaatggtaaagaatacagagactgtcag
attgtgttcatctttgatggtttggatgagagtcgaagtttactacatttccagccgaag
atgttggtgtctgatgttgaacaaatatcatcagtggatgttctgatgacaagcctcatt
caggggagtctgcttcccgctgcactcatctggataacctcacgaccagcagcaaccagt
caaattcctgctcagtgcattgatcaggtgacagaagtacgagggttcaatgaccctcag
aaggaagagtacttcaggaagagaatcagtgatgagagtcaggccaccagaatcatctca
cacattaaggcttccaggagtctccacatcatgtgccacattccagtcttctgttggatt
gcagccacagtacttcagcagatgctggaacaggacaacacccaggaagtcccccaaagt
ctgactgaaatgttcatacaatttctgctcatccaaatcaccagaaagaatcagaagtat
caaactggaaaacagacaaataaagagcagctcctggaatcacaggaagaaattatactg
aagctggcaaaactggctttcgagaatctagtgaatggcaatgtcatgttttacgaagaa
gacctgagagagtgtggcattgatgtcagtgaagcctcagtgtattctggcatgtgcact
gaaatcttcaaggaagaatctgtgtttcaccagaggaaggtctactgctttgtgcatcta
agcatccaggagtttctggctgcacttcatgtttttgtctcttacgtccagcagatgcag
accatagggaattttttctgcttggaagagtcgctaaagttggcagtaaccaaagttttg
gaaagcaggaatggacacctggatcttttccttcgattccttatgggcatctctctggag
agaaatcagagacttttggaaggtctactgaaccacacacacaacagctcagagagcatt
aggaaaatgtgtcagtacattaaagagctcaacaaagaggatctttcccctgaaagatgc
atcagtcttttgcagtgcttatctgaaatgaatgatcatgccatgcatgaagaaattcaa
gagtacctgaaattaccaaagggcttcagacagaaattgtctcctgctcactgttcaaca
ctggcccacatgcttctgatgtctgaagaggtgcgggaagagtttgacctgaagacatac
aacacatcagatgaaggacgcaggagaatgatcccagccctgaggtgcttcagaacagca
aaacttggtgactgtaaactcagtggtgaatcctgcaagattgtggcctgtgttctgcat
tcagtaaactccctaatagagctggacctgagtcacaatgatcttggagattctggagtc
cagcttctgtgtgagggactggccagtcctcactgtcatctgcagatattaaggctgtct
tgttctctaatctcagagggaggctgtggatttctggcttcagctctgacttcaaacccc
tctcatctaaaagagctggatctgagctataaccatcctggagaatctggatttaagctg
ttttctgctagactggaggatcctcactgtaaactggagatacttaatgtggaccactgc
gcagaaatcagactcagaccaggtgtgcagaaatatccttgtgagctcacactggacccg
aacacagcatacatacgactctctctctctgaggggaacagaaaggtgacatgtgggaat
gaagaccagcggcatcctgaccacccagagagatttgacagctggcctcaggtgttgtgt
aaagagggtctgactggacgctgctactgggaagctgagtggagtgggggtgcggctcat
atagctgtggcgtataaaagcattaagaggaaaggaaagagtgatgactgctgtcttgga
tataatgacaagtcctggagtctgtactgctctcctgacagttactatgtctggcacaat
aatgtacgcactgacatacctgacccctcctcccgctccagcacagtaggagtgtacctg
gactggccggccggcactctgtccttctacagcgtctccgctgacacactcacccacctg
cacgcgttccactccacattcactgagcccctctatccagggtttggggttcatgatgac
tcctcagtgtccctgtgccagatc
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