Clupea harengus (Atlantic herring): 105889660
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Entry
105889660 CDS
T09045
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105889660 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105889660 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105889660 (snw1)
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19-related factors
105889660 (snw1)
Complex C
105889660 (snw1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
105889660
NCBI-ProteinID:
XP_012671020
Ensembl:
ENSCHAG00000020347
UniProt:
A0A6P3VFS4
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Position
15:complement(8446581..8463854)
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AA seq
537 aa
AA seq
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MSLTSFLPAPTQLSQDQLEAEERVRTQRSHSTALVSSRREPPAYGFRKAWVPRTMEEFGD
GGAFPEVHVAQYPLEMGRKKKTSNALALQVDAEGKIKYDAIARQGQGKEKVIFSKYTDLL
PKEVLNDEAPELQRPDEEAVKELTDKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKAGGEDGETRERDDIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSDAQYDQRLFNQSKG
MDSGFAGGEDEMYTVYDQPFRGNRDMAQNIYRPSKNADKDMYGDDLDTLMQNNRFVPDRE
FSGADHGPRRDGPVQFEEDPFGLDRFLEEAKQHGGSKRPSASGRSKDYDHEKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaacgagctttctaccagcgcctacgcagctgtcccaggaccagctggaggcg
gaggagcgggttcgcacccagaggtctcattccacagcgcttgtgtcttcgcgtagagaa
ccacccgcctatggcttcagaaaagcatgggtcccccgcacaatggaggaatttggagat
ggaggtgctttcccagaagtccatgtggcccagtacccgctggaaatgggcagaaagaag
aaaacctccaatgccctggcattgcaggtggatgctgagggcaaaatcaagtatgatgcc
attgccaggcagggccagggcaaagagaaggtgatcttcagcaaatacacagacctactt
cctaaggaagtcctaaacgacgaggccccagagctgcagaggcctgatgaggaggctgtg
aaggagctcacggacaagacgcgcgctgctctggacaagcaagtctcgcagaagatcgcc
gctgctatgcctgttcgtgccgcagataaacaggccccagctcagtatattaggtacaca
ccttcacagcagggagtggcgttcaactccggagccaagcagcgagtcattcgcatggtg
gagatgcagaaggatcccatggagcccccacgcttcaagatcaacaagaagattcctcgc
ggacccccatctcctcctgctcccgtcatgcactcccccagcagaaagatgactgtgaaa
gaacagcaggaatggaagattcctccatgcatctccaactggaaaaacgcaaagggttac
acaatcccactggacaagcgcttggctgcagatggaagaggcctgcagacggttcatatc
aatgagaactttgccaagctggctgaggccttgtacatagcagacagaaaagcccgagag
gcagtggagatgcgcgcccaagtggagaagaagatggctcagaaggagaaggagaagaaa
gaggagaaactgcgcgagttggcccagatggctcgcgaccgcagggccgggatcaagagt
cacggagacaaagcaggtggtgaggacggtgagaccagggagcgtgacgatatccgccac
gacaggaggaaagagagacagcacgacaggaacatctcccgggccgcgcccgataagagg
tccaaactgcagagggaccaggaccgagacatcagtgagctcatcgccctgggccagccc
aacccccgcacctccagtgacgcccagtatgaccagcggctcttcaaccagagcaaggga
atggacagtggctttgctggaggggaggatgagatgtacactgtgtacgaccagcccttc
aggggaaacagggacatggcccagaacatctacagacccagcaagaacgcagacaaggac
atgtatggggatgacctggacacactcatgcagaacaacaggtttgtgccggaccgggag
ttctctggtgccgaccacggccctcgtagagatggtcctgtccagtttgaggaggatcct
ttcggtctggacaggttcttggaggaagccaagcagcacggtggctccaagaggccctcc
gccagcggccgctccaaggactacgaccacgagaagaagcgcaggaaggagtga
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