Clupea harengus (Atlantic herring): 105889662
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Entry
105889662 CDS
T09045
Symbol
sptlc2b
Name
(RefSeq) serine palmitoyltransferase 2b
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Module
char_M00094
Ceramide biosynthesis
char_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105889662 (sptlc2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105889662 (sptlc2b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
105889662 (sptlc2b)
Amino acid related enzymes [BR:
char01007
]
Aminotransferase (transaminase)
Class II
105889662 (sptlc2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
105889662
NCBI-ProteinID:
XP_012671022
Ensembl:
ENSCHAG00000019333
UniProt:
A0A6P3VGS5
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Position
15:complement(8428254..8441972)
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AA seq
565 aa
AA seq
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MTESSTSKLLNGDTCHRTANGKKAVRNGFVKNHCIFRQQQLQKYRRPNEKSHHVSRNAAL
YNKPFMESFEETPLLVAVLTYMGYGILTIFGYLRDFLRDWKIEKCHIAREREEQKDFVPL
YQDFENFYTRNLYMRIRDNWNRPISSVPGARMDLVERVTPDYNWTFEHTGKVNKDVINMG
SYNYLGFAENTGMCADAATEATLQYGVGVTSTRQEMGNLDKHEELENLVASFLGVEASMV
FGMGFATNSMNIPALTGKGCLILSDELNHASLVLGARLSGSTIRVFKHNNMQSLEKLLRD
AIVHGQPRTHRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGP
RGRGVVDYFGLDPRDVDIMMGTFTKSFGAAGGYIGGKKELIDYLRAHSHSAVYAASMSPP
VAQQIITSMKCIMGEDGTNLGLDRLRQLSENTTYFRRRLQELGFIIYGNEASPVVPLMLY
MPAKIGAFGREMLKRNIGTVVVGFPATPIIESRARFCVSAAHTRGMLDTALNAINEVGDL
LQLKYSRHGRQSPLEEATSFLESLE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagctccacaagtaaattgttaaatggagatacttgtcaccgaaccgccaac
ggaaagaaggccgttagaaacggattcgtgaagaaccactgtattttccgacagcagcag
ctgcagaagtaccgccgcccgaatgagaagagccaccatgtctcccgaaatgctgcactg
tacaacaagccgttcatggagtccttcgaggagacccctctcctggtggccgtcctcacc
tacatgggctacgggatcctcaccatttttgggtacctccgtgacttcctcagggactgg
aaaatcgagaagtgccacattgccagggaacgtgaggagcagaaggactttgttcctctg
tatcaggactttgagaacttctacacccgaaatttatacatgaggatccgggacaactgg
aaccgacccatcagcagtgtcccgggagcccgaatggacctggtagagcgcgttaccccg
gactacaactggacctttgaacacacaggcaaggtaaataaggatgtcatcaacatgggc
tcgtataattacctcggctttgctgagaacacaggcatgtgtgcggacgcagccaccgag
gccaccctgcagtacggcgtgggagtcaccagcacccgtcaagaaatggggaacctggac
aaacatgaggagctggagaacctggttgccagtttcctgggcgtcgaggcctccatggtt
ttcggaatgggctttgccacaaactcgatgaatattcctgctttgacaggcaaaggttgt
ttgattctgagtgatgagttgaaccatgcctctctggtgctcggggcaaggctgtctgga
tccaccatccgcgtcttcaaacacaacaatatgcagagtcttgagaaactcctgcgagac
gccatagtacatgggcagccccgaacgcaccgtccctggaagaaaattctcatcctggta
gaggggatttacagtatggagggctccattgttcgactgcctgaagtgattgcactgaag
aagaaatacaaggcctatctgtacctggacgaggcccacagcattggggcgctaggaccc
aggggcaggggcgtggtggactactttggtttggacccgcgggacgtggacatcatgatg
gggacctttacgaagagctttggagcagctggtggctacattggtgggaaaaaggagctg
attgattacctgcgcgcgcactcccacagtgcagtctatgctgcctccatgtctccgcca
gtcgcccaacagatcatcacttctatgaagtgcattatgggagaagatggcaccaatctt
ggtctggaccgtctccggcagctctcggagaacaccacttatttccggcggcggctccag
gagttgggcttcatcatctacggaaatgaagcctccccggtggtgcccctgatgctctac
atgcctgccaaaattggtgcgtttggccgggagatgctgaagaggaacattggcacagtg
gtggtgggcttcccagccaccccaatcatcgagtcgcgggcacgtttctgtgtctcggct
gcgcacaccagagggatgctggacacggcgttaaacgccatcaacgaagtgggggatctg
ctccagttgaaatactcacgacacgggaggcagtctcctctcgaggaggccacgtcgttc
ctggagagcctggaatga
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