Clupea harengus (Atlantic herring): 105889720
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Entry
105889720 CDS
T09045
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105889720 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889720 (nup160)
03036 Chromosome and associated proteins [BR:
char03036
]
105889720 (nup160)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105889720 (nup160)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105889720 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
105889720
NCBI-ProteinID:
XP_031421108
Ensembl:
ENSCHAG00000011531
UniProt:
A0A6P8EXX9
LinkDB
All DBs
Position
3:complement(28071858..28084626)
Genome browser
AA seq
1397 aa
AA seq
DB search
MAALDRSFIEICGFERETFSRFRDITVNLGLSALPGGVKCPDSAGGFYYEESGKLLSVAS
NRFIHWSTSGDTVQLVEQSLDTNLLNNAVRLKIPHCQLLPGGVHIQETVNNVIILIVTNQ
SVHRLALPHPSRMYRSELVTELQMQSIFTDVGKLSLQDPAHSYVLPSGPGLPSVSPSTSA
AWISQEGEAHFALATASGGILVVCLPPHDSPGMVATVELKQSSVMQRLAGWMPTAIRGDQ
SPSDLALSLAVRQLEDDTFIFALCQDHKLRMWSYKEQVCLMVADMLEYLPVGRGEVKSVP
GQGHRLRLSFSSTTGLCLGVYLGLPKRGQFCVLQLVADNNRYSLDHLSTLFTTQDTLVDF
DLTSTDIWGLWLDDDNQTVVKYINFEHNSAGLWNQVFMHPAPGEEVHIGIDQDPREAYLE
ILFSPLQFTAMAIVKALQIYKRGTERYLDLPWESLKREVTLAVENELQNSVTEYEFSQEE
YRQLQVEFWSKFYACCLQYQEALSTPLALLINQATSMACVLKKGYVSYLLPCFAVDHLYL
SADEYLFSEEETPVAEDPEVGRDVLQLVQCLRLVSESLQGDMAYDMEKALDHLQSPEKAA
EQVLETMLANDSENVIEEIQNKLQDIRNPMMAMSVLLREMDLEMDAETGAEGAALAAAGR
SLNVRISLSQLYGSSVAVSVVCQAVCNMALTRAMLCRDLLILQQFYLRLGDNVFLGGGAQ
LLQLQQDLIPRCSHLLCSYYLLKKISQSLASSVPLDILDANLQHLSVLELSDSPAMAPNR
SVLNPQTVVELFYQNVARKIVVSQIYLQQEAQSSQVPLHWPHMASSVVTSLAQLLWPSNP
GFLFPECLMGNCQYTQLQEYVRLIGPWCQVNVGSCRFILGQCYLATGEGQKALQCFQEAA
TEVEKEDFLLKLCGTEEEEVASAPRLQYYNKVLRLLEDVALPELVIQLATLAISEAVNDT
RSQAALWTRIFKHHLDLGHNSQAYEALVQNPDQSRQLDCLRQLVVVLCERSQLKDLVQFS
YVNLHDEVVSIIESRARAVDLMTHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRT
LHGLQKQVNCYLAALNCLRLIRPDYAWIVQPSSGSTYERPGASPKRNYDGEFAPGPVKRQ
IDILELKDLEKEYNLARSRLTLAQHHPPSAAIAGSASAVEMVALLVQTGLFDTALSLCQT
FKLPLTQVFEGLTFKCIKLQYGGEQSQNEAWNWLAANQLSSIVTTKESSATDEAWRLLAS
YLEAHPSQNAQHYRCVINKLLSHGVPLPDWLVNDYKAVDTAALLRLYLKFDQLESATELV
LEYVDALLGKGHQYFGIERPLSATAPVVWLPYTSIDQLLFNLGESQINMKLYEKLKAKLD
EYHGVVEKATRHRILAH
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttggacaggagcttcatagaaatatgtggatttgagagggaaacattttca
cggttccgcgacatcactgtcaacttaggattaagtgctcttccaggaggagtcaaatgt
ccagacagtgccggtggcttttactatgaagagagtgggaagctcctgtctgtcgcaagt
aacagatttatacactggtccacatctggggacacagtccagctggtggaacagtcactg
gacacgaacctgctcaacaatgcagtacgtctgaagatcccccactgccagcttctgcct
ggcggagtgcacatccaggagactgtcaacaatgtcatcattctcattgttaccaaccag
tcagtccatcggctggctctgccccatccctcccgcatgtaccgcagtgagctggtcaca
gagctccagatgcagtccatcttcacagacgtggggaagctgagcctgcaggaccctgca
cacagctacgtcctgcccagcggcccgggcctgccttccgtcagccccagcacctccgca
gcctggatcagccaggagggggaagcccactttgctctggcgaccgcctctggtggcatc
ctggtcgtttgtcttccccctcatgactcaccagggatggtggccacagtggagctgaag
cagagctcagtcatgcagagactggctggctggatgcccactgctatcaggggggaccag
agcccatcagacctggccctcagtctggccgtcagacagctggaggacgacactttcatc
ttcgctctctgccaagatcacaagctgcgcatgtggtcctataaggaacaggtgtgcctg
atggtggctgacatgctggagtacctgccggtgggccgtggcgaggtgaagagtgtgccg
gggcagggccacaggctgcgcctctccttttcctccaccaccggcctgtgcctgggcgtc
tacctcggcctgcccaagcgtggccagttctgtgtgctgcagctggtagccgacaacaac
cgctacagcctggaccacctctccaccctgttcaccacacaggacacactggtggatttt
gacttgacatctactgacatctggggtctttggcttgacgatgacaaccagacagtggtg
aaatacatcaactttgagcacaactcagctggcctgtggaatcaggtattcatgcatcct
gcgccaggggaggaagtccacatcggcatagaccaggacccaagggaggcctaccttgaa
atactcttctctcctcttcaattcactgctatggccatagtcaaagccttacagatttat
aaaagaggcaccgagaggtaccttgacctgccttgggagtcactgaagagggaggtgacc
cttgcagttgagaatgagctccaaaatagtgtcactgagtacgagttctctcaggaggag
taccgccagctgcaggtggagttctggtccaagttctatgcctgctgcttgcagtaccag
gaggccctgtccactcccctggccctgctcatcaaccaggccacctccatggcctgtgtg
ctgaaaaagggctatgtgtcttacctgttaccgtgctttgctgtggatcatctttacctg
tctgccgatgaatacctcttctcggaggaggagactccagtggctgaagaccctgaggtg
ggccgggacgtgctgcagctggtgcagtgcctgcggctggtgagtgagagcctgcaggga
gacatggcctacgacatggagaaggccctggaccacctgcagtccccagagaaggccgcg
gagcaggtgctggagaccatgctggccaatgacagtgagaatgtcatagaagaaatccag
aacaagctgcaggacatccggaacccgatgatggccatgtctgtcctgctcagggagatg
gacctggagatggatgctgagactggggctgaaggagccgcactcgctgcagcaggccgt
tctctgaacgtgcgcatcagcctctcgcagctgtacggcagcagcgtggcggtgagcgtg
gtgtgccaggccgtgtgcaacatggccctcacgcgagccatgctctgcagggatctcctc
atcctgcagcagttttacctccggcttggggacaatgtctttctgggaggaggtgctcag
ctgctgcagctacagcaggacctgatcccacgctgctcccacctgctctgctcctactac
ctgctgaagaagatcagccagagcctggcctcctccgtgcccctcgacatactcgatgcc
aatctccagcatctgtccgtactggagttgtccgactcccctgccatggcacccaacaga
tcagtcctaaatccccagacggtggtggagctcttctatcagaatgtggcgcgtaagatc
gtcgtgtctcagatctacttgcagcaggaggcccagtctagtcaggtgcctctgcactgg
ccgcacatggcgtccagcgtggtcaccagtctcgcacagctcctctggccaagcaaccct
ggctttctgttccctgagtgccttatggggaactgccagtacacacaactgcaggaatat
gtgcgcctgattgggccctggtgtcaggtgaatgtgggctcctgtcgcttcatcctgggg
cagtgctacctggccactggggagggacagaaggccctccagtgcttccaggaggcggcc
actgaggtagagaaggaggacttcctcctgaagctctgcggcacggaggaggaggaggtg
gccagtgcccctcggctgcagtactacaacaaggtgctgaggttactggaggatgtggct
ttacctgagctcgtcatccagctagccacgctggcaatatcagaagccgttaatgacacc
agaagtcaggcagccctctggactcgcatcttcaaacaccatctagacttgggccacaac
agccaggcctatgaggctctggtccagaacccagaccaaagcaggcagctggactgtctc
cggcagctggtggtggttctgtgtgagcggtcacagcttaaagatctggtccagttctcc
tatgtcaacctgcacgatgaggtggtgagtattattgagtctcgtgccagagccgtggac
ctcatgactcacaactactatgagctgctctacgctttccatatcaaccgtcacaactat
agaaaagccggtacggtgatgtttgagtacggcatgcgtttgggtcgggaggtgcgcacg
ctccatggcttgcagaagcaggtgaactgctacctggccgccctcaactgcctgcggctc
atccggcctgactatgcctggatcgtccagccctcctctggaagcacgtatgaacggccg
ggtgcatcaccaaaacggaactacgatggagagtttgccccaggcccagtgaagcgccag
attgacatcttggagctgaaggacttggagaaggagtacaacctggcccgcagtcgcctc
acgctggcccagcaccaccctccctcagcagccatagcaggaagcgcctccgcagtggag
atggtggcgttgcttgttcaaacgggcctctttgacacggcgctctccctctgtcagaca
ttcaaactgcccctcacgcaggtctttgaagggctgacgttcaagtgtatcaaactgcag
tacggtggggaacagagtcagaatgaagcctggaattggctggcagccaatcagctctct
tctatcgtcactaccaaggagtccagtgctactgatgaggcatggcggctcttagcttct
taccttgaggcacatccttcccagaatgctcagcactaccggtgtgtcatcaacaagctg
ctctcacatggtgtgccattgcctgattggctggttaatgactacaaggctgtggacacc
gctgctctgctacggctttatctgaagttcgaccagctggagtcggctacggaactggtc
ctggaatacgttgacgctcttcttggaaagggacaccagtactttggaatagagagacct
ctgtcagccacagcgcccgttgtttggcttccgtatacatcgatagaccagctactgttc
aacctcggtgaaagtcaaattaacatgaagttgtatgagaagttgaaagccaagctggac
gagtaccatggagtggtggagaaagcaaccagacacagaatcctggcccactag
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