Clupea harengus (Atlantic herring): 105889724
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Entry
105889724 CDS
T09045
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889724 (kcmf1)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105889724 (kcmf1)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105889724 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
DUF6244
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
105889724
NCBI-ProteinID:
XP_012671091
Ensembl:
ENSCHAG00000023931
UniProt:
A0A6P3VFW4
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All DBs
Position
12:13294094..13310761
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AA seq
398 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYETGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLPHDETSGVRHVRRMFHPGRGLGGPRARRTNMHFTSSST
GGLSSSQSSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLE
RQQAQAARQQLETARNATRRSNPGNISGGGGGGGGSGAAAIPPSSNTANNPASLPESNTL
AQHSSQFLLTRLNEPKMTEAERQALEGERADRSLFVQELLLSTLMRDESSSSDEDERRDF
ADFGAMGCVDIMPLDMALESLNLKRESFTGKEPPPPPL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgacgcgtgtttaaaagggaacttcagggggcgc
cgctacaagtgtttaatctgctacgactacgacctgtgcgcgtcgtgctacgagacggga
gccactaccaccagacacaccacggaacatcccatgcagtgcatactaaccagggtagac
tttgatctgtactatggcggggaggccttctcagtagaacagcctcagtcattcacgtgt
ccctactgcggcaagatgggctacacagagacctccctacaggagcacgtcacctcggag
cacgccgaaacctccacggaggtgatttgccccatctgcgctgccttgcccggaggcgac
cccaatcatgtgacagacgactttgccgctcacctcacacttgaacacagagcacctaga
gatttaccccacgatgagaccagtggcgtgcggcacgtgcgccggatgttccaccctggc
cgagggctggggggtccgcgggcccgccggaccaacatgcactttaccagcagctccacc
ggggggctctcctcctcacagagctcctcctactctccaagcaatagggaagccatggac
cccatagcagagttgttgtcccagctgtcgggcgtgcgccgctcggcgggcggccagctc
aactcgtcagggccgtcggcctcgcagctgcagcagctccagatgcagctgcagctcgag
cgccagcaggcgcaggcagcgcggcagcagctggaaacggcgcgcaacgccacgcggcgc
agcaaccccggcaacatcagcggcgggggaggaggtgggggtggcagcggggcggccgcc
atcccgccctcgtccaacacggccaacaacccggccagtctgcccgagagcaacacgctg
gcccagcacagctcccagttcctgctcacacggttgaacgagcccaagatgacggaggcg
gagcggcaggcgctggagggtgagcgggccgaccgcagcctgttcgtgcaggagctgctg
ctgtccacgctcatgcgggacgagagctcctcctcggacgaggacgagcgccgagacttc
gccgacttcggggccatgggctgcgtggacatcatgccgctggacatggcgctggagagt
ctcaacctgaagagggagagcttcacgggcaaggagcctccgccccctcctctttga
DBGET
integrated database retrieval system
