Clupea harengus (Atlantic herring): 105889736
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Entry
105889736 CDS
T09045
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105889736 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889736 (trim33)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105889736 (trim33)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
105889736 (trim33)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105889736 (trim33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
Mito_fiss_reg
zf-C3HC4
EOS1
Motif
Other DBs
NCBI-GeneID:
105889736
NCBI-ProteinID:
XP_042563537
Ensembl:
ENSCHAG00000018565
ENSCHAG00000018593
UniProt:
A0A8M1KI34
LinkDB
All DBs
Position
4
Genome browser
AA seq
1275 aa
AA seq
DB search
MADNKGEGDTENCTAMDIVVQGEDSGIPTAKDTDGVIVIEPISNEEVDGQSQDNVSQVPT
PTGGGSDGSNVNVSSDAGGGGEGSSRTSPNGNSNSVSTVPPASGDNTVNSPAVSAETSPS
PSANVTAAATPAAPLNLLDTCAVCKQSLQNRDCEPKLLPCLHSFCLKCIPQPERQITVQV
PGPHGQDTHIVNVMRCAVCHQDYKQTDIVDNYFVKDTSEASNTSVENSGQVCTSCEDDAT
ALGFCVECGEWLCKTCIEAHQRVKFTKDHKIRKKEDLSPEAVGASGQRPVFCPVHKQEAL
KLFCETCDTLTCRDCQLLEHKEHRYQFLDEAFQNQKGIIETFMAKLQEKRSYVHFSATQV
QSRLKEVTETHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSVRLLSQQKDINS
LGQQILHVLNFTHWALTNGSSTALLYSKRLITYQLRYILKARLDPAPHANGAVRFFCDPT
FWAKNVVNLGNLVIEKVPPSAHPPNMMTQMPPGHNHHGKHPGQINLAQLRLQHMQQAAVL
AQKQQHHQQHHHQHHQHQQQQHQQQQQQHQQQQQQHQQLQQQHQQQIQQQMRIASQMSQM
PRQAGPGLVQQQPPRLISMQQRGDVNGGPQHMYPPHALRMPPGQVRTSSAQPRLSGQQYP
MMQPQLQRQHSNPGHAGPFPVASLHNVSATSPTSPTSASMANAHAYRGPASPIIGAIELI
PSVTNPENLPCLPDIPPIQLEDAGSVMLDNILSRYISASQHQSLNPFNMNITTSPAPSIH
SPGSSGLSNSHAPVRPSSTSSTGSRGSSGSAGRLGPAAPPAGELVKVKQEPGVEEESPYS
VASVKSELGKDGRRSACMMSSPESSNATPPLPVLGNVSSGSVQDILKSLGGIVKTEPQDN
TSGCSQSNRSATTSSTSSLSSSQTPTGPPPPPPPPPPPPPAPLTNGNASNPAAAGSVTEP
QANGGASSQSAGGAVDGNKEDDPNEDWCAVCQNGGELLCCDRCPKVFHITCHIPTLRCSP
SGEWMCTFCRSLSSPEIEYNCDDDAPKKDQSEPVLSPEDQRRCQRLLLYVFCHELSVEFH
EPVSSTVPNYYKIIKQPMALNTVKQKLQLKHPEHYHSPGEFVADVRLVFSNCAKYNEMSR
IIQVYEEEQINVQADSEVAEAGKAVSLYFEERLVQLYPDQNFPVAPDDKPSMDKEKEEKE
KETEKEKEMEKEKEKEKEKENEMEMEMEMEKEKEKEKEKEEEEVGADKEASDDSDDDIQP
KRKRLKAEDKTLHIK
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaaggggatacggagaactgcactgctatggatatagtggta
cagggggaagacagtggaatccccacagctaaagataccgatggcgtgattgttatagaa
cctatatcaaatgaagaggtggacgggcaatcccaagataatgtatctcaggtgccgaca
cccactggtggaggcagcgacgggagtaacgttaacgttagcagcgacgcaggaggtgga
ggagaaggcagcagccggactagtccaaatggcaactccaattctgtgtccacggtgcca
ccagcttctggtgataacaccgtcaactcgcccgcagtttcagccgaaacgtcgccctct
ccatcagctaacgttacagccgcagccacccctgcagccccgttaaacctactggatacg
tgcgctgtgtgtaaacaaagtctacagaatcgagactgtgaacccaaactcttaccatgt
ctgcattcattttgtttaaaatgcattcctcaacccgagagacaaattacagttcaagtc
cccggaccacatggacaggacacacatattgtgaatgtgatgcgatgtgcagtgtgccac
caggactacaaacagacagacatcgttgacaactactttgtcaaggatacctctgaggcc
tcgaacacttcggttgaaaactcggggcaggtgtgcacgagttgtgaggacgatgcaact
gcgttgggcttctgcgtagaatgtggagagtggctgtgcaagacctgcatcgaagcgcac
cagagggtcaagttcaccaaggaccacaagatacgcaaaaaagaagacctgtcccctgag
gcagtgggggcgtcggggcagcgacctgtcttctgtcccgtacacaagcaggaggccctg
aagctcttctgtgagacgtgtgacacactaacctgccgagactgtcagctactagaacac
aaagagcacaggtaccagttcttagatgaggcttttcagaaccagaagggcatcattgag
acctttatggctaaactccaggagaagaggagctatgtccatttttcagccactcaggtg
caaagcagacttaaagaggttaccgaaacgcacaagaaggtggaacatgagatcaagatt
gctgtgttcacactcatcaatgagattaacaagaagggaaaatcacttctccagcagctg
gagagtgtgacgaaggagcgcagtgtgcgtctgctcagccagcagaaggacatcaacagt
ctgggccagcagatcctgcacgtgctcaacttcacccactgggcgctcaccaacggcagc
agcaccgcgctgctctacagcaagaggctgatcacctaccagttgcggtacattctgaag
gcccgtctcgacccagcgcctcatgccaacggcgccgtgcgtttcttctgtgaccccacc
ttctgggccaagaacgtggtcaaccttggtaacctggtgatcgagaaggtccctccgtcc
gctcacccacccaacatgatgacccagatgcccccgggtcacaaccaccacgggaagcac
ccgggccagatcaacctggcccagctgaggctgcagcacatgcagcaggcggctgtcctg
gcccagaagcagcagcatcaccagcagcatcaccaccagcaccaccaacaccaacagcaa
caacaccaacaacaacaacaacaacaccaacaacaacagcagcagcatcagcagctacag
cagcagcaccagcagcagatacagcagcagatgcgcatagcctcgcagatgtcccagatg
cccaggcaagcagggcctgggctggtccagcagcagccccccaggctcatcagcatgcag
cagaggggggacgtgaacggcggcccacaacacatgtacccaccccatgccctgcggatg
ccccctggtcaggtgcgcacgtccagtgctcagcctcgcctcagcgggcagcagtacccc
atgatgcagcctcagctccagagacagcattccaacccagggcatgctggtccatttcct
gtggcgtcgctgcacaacgtgagcgctaccagccctaccagccccacgagcgccagcatg
gccaatgcccacgcatatcgcggacccgccagccccatcattggcgccatcgagctcata
ccctccgttaccaaccctgagaatctgccgtgcctgcccgacatcccgcccatacagctg
gaggatgcgggctccgttatgctagacaacatcctgagccgttacatctcagccagccaa
caccagagtctgaaccccttcaacatgaacatcaccacctcacccgcgccctccatacac
tcccccggctcctcagggttatctaactcccatgctccggttcgtccctcgagcacctcc
agcacaggaagtcggggcagctctggctctgctggcaggttgggtcctgcagctccccct
gctggtgagctggtgaaggtgaagcaggagccgggcgtggaggaagagagcccctactcc
gtagccagcgtcaagagcgagctcggcaaggacggccgacgcagtgcctgcatgatgagc
agcccagagagcagcaatgccacaccccctctgcccgtcctcggtaacgtgtcgtcaggt
tccgttcaggacatcctcaagtcgctcggcggcatcgtcaagacggaaccccaggacaac
accagcggctgcagccaatccaacaggagcgccaccacctcttctacctcctccttatcg
tcatctcaaactcccacaggaccacctccccctccgcctccccctcccccgccccctccc
gcacctctgaccaatggcaacgcatctaatccagcagcagcgggctcagtgacggagccg
caggccaatggcggagcgagcagtcagagcgcgggcggggccgtggatgggaataaagaa
gacgatccgaatgaggactggtgtgccgtgtgtcagaacgggggagagttgctctgctgc
gaccgctgtcccaaagtcttccacatcacctgtcacatccccacactacgctgctcacca
agtggtgagtggatgtgcaccttctgccggagcctgagtagccccgagatcgagtacaac
tgtgacgacgacgctcccaagaaggaccagagcgagccggtcctgagtcccgaggaccag
cggaggtgccagcggctgctgctgtatgtgttctgccatgagctgagcgtggagttccat
gaacccgtgtcctcaacggtccccaactactataagatcattaagcagccaatggccctg
aacacggtgaagcagaagctgcagctgaagcacccggagcactaccacagccccggcgag
tttgtggccgacgtgcgcctggtcttcagcaactgtgccaaatacaacgagatgtctcgc
ataatccaggtttatgaggaggaacagattaatgtgcaggcggactcggaagtggcagag
gctgggaaggcagtgagtctgtactttgaggaaaggctggtgcagctctaccctgaccag
aatttccccgttgcccccgacgacaagccctcaatggacaaggagaaggaggagaaggag
aaggaaacggagaaggaaaaagagatggagaaagagaaagagaaggagaaggagaaggag
aacgaaatggaaatggaaatggagatggagaaggagaaggaaaaggagaaagagaaagag
gaagaggaagtaggagcggacaaggaggcctccgacgactcagatgatgacatacagcca
aaacgcaagcgcttaaaagcagaggacaagacactgcatataaaatga
DBGET
integrated database retrieval system
