Clupea harengus (Atlantic herring): 105889757 Help Entry 105889757         CDS       T09045                                  Symbol nup54 Name (RefSeq) nucleoporin p54 isoform X4   KO K14308   nuclear pore complex protein Nup54 Organism char  Clupea harengus (Atlantic herring) Pathway char03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     105889757 (nup54)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:char03019]     105889757 (nup54) Messenger RNA biogenesis [BR:char03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      105889757 (nup54) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup54 Nup54_a-b Nup54_C CDH23_a-b ToxA_N FAST_2 Motif Other DBs NCBI-GeneID:  105889757 NCBI-ProteinID:  XP_012671138 Ensembl:  ENSCHAG00000027627 UniProt:  A0A6P3VGK8 LinkDB All DBs Position 12:complement(4801265..4813116) Genome browser AA seq 532 aa AA seqDB search MAFNFGGAAAPNPASTSGFSFGSFAAKTTAPTAFGFGPTTTTTASTGFGSFGTGFGAPAT TAAATGFSFGAPTAGGLFGAPQNKGFGGFSGLGAAPAGMSGFGTGMTGGGLGFGGFNMQP AQQQQGGLFGQQAQAPAQSNQLIYTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGFF NNNMPPVDFTQENPFCRFKAVGYSCTPGSKDEDGLLVLVLNKKEADVRALQQQLVETLHK VLGGHQNLSVNVEGVKTLPDDQTEVIIYLVERSPNGTSKRVPASTLFNFAEQANVKMQLQ QLGVLMSLTRTALSPAQLKQLLQNAPAGVDPIIWEQAKEDNPDPDKLIPVPMVSFKELLR RLKIQDQMTKQHQTRTDIIANDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEI QRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSV DTDLLREIRQHLKQQQDGLSHLIGVVKDDMEDIKLIEHGLHDSVHIRGGKLS NT seq 1599 nt NT seq  +upstreamnt  +downstreamnt atggcgttcaattttggcggcgctgccgcaccaaatcctgcaagcacttcaggattttca tttggttcattcgctgccaaaacaacagcacccaccgcttttggttttggtcctaccaca acaactacagcttccactggattcggtagttttggtacgggtttcggtgctcctgccacg actgctgccgccactgggtttagctttggcgcccctaccgcaggtggcctgtttggggct ccccagaataagggctttggcggcttctctggtctgggcgctgcgcctgccgggatgagc ggctttgggacgggcatgaccggaggtggtttgggctttgggggcttcaatatgcagcct gcacagcagcagcaaggaggtctttttgggcagcaagcccaggctccagcacagtccaac cagctcatatacacagccagcgccctgtcggcacccaccctactgggtgatgagcgagat gccatcctggccaagtggaaccagctgcaggccttctggggcacaggcaagggcttcttc aacaacaacatgcccccagtggacttcacccaagagaaccccttctgcaggttcaaggcc gtgggctacagctgcacccctgggagtaaggatgaggatgggctgctggtgctggtgttg aacaagaaggaggctgacgtgagggccctgcagcagcagctggtggagaccctgcacaag gtgctgggaggacaccagaacctcagcgtcaacgtggagggagtcaagacgctgcccgac gaccagaccgaggtgatcatctacttggtggagcgctcccctaacggcacgtccaagcgg gttccggctagcacgctcttcaacttcgcggagcaggccaatgtcaagatgcagctgcag cagctgggcgtgctcatgtccctcacacgcaccgccctctccccggcccaactcaagcag ctgctccagaacgcgcccgcaggtgtggatcccatcatatgggaacaagccaaagaggat aaccctgaccctgataagttgattcctgtgccaatggtgagctttaaggagttgctccgc cggctgaaaatccaggaccagatgaccaaacagcaccagaccagaactgatataattgcc aatgacattagcgagctgcagaagaatcaagcaaccactgtggccaagatagctcagtat aagaggaagctgatggatttgtcccacagggtgttacaggtgctgataaagcaggagatc cagaggaagagtggctatgccatccaggtggatgaggagcacctccgggtgcaactggac accatccagtccgaactcaacgcccctacgcagtttaagggccgactgaatgaactgatg tcccagattcgcatgcagaaccactttggggctgtgcgctcagaggagagatacagcgtg gacaccgacctgcttagagagatcagacagcacctgaaacagcaacaggatggtctaagc cacctgattggtgtcgtcaaagatgacatggaagacatcaaactcatcgagcacggtctc cacgacagcgttcacataagagggggcaagctgagctga

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