Clupea harengus (Atlantic herring): 105889764
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Entry
105889764 CDS
T09045
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5
KO
K08538
farnesoid X receptor beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105889764 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105889764 (nr1h5)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105889764 (nr1h5)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
105889764 (nr1h5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105889764
NCBI-ProteinID:
XP_012671142
Ensembl:
ENSCHAG00000018560
UniProt:
A0A6P3VGY7
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Position
4:complement(5578591..5590533)
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AA seq
483 aa
AA seq
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MREWTEAEMAMSGGSYLSSDGYSISEPLQYYDVLVDPLGYPFQESELPAFPFSQQQYNPV
NVQFSVYGPPNTQPCSAPYPCGSPGPDFNCDPDLEVVPAQGRAMLSGHPLMKRPRLGPGA
RVRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGTCEMDMYMRRK
CQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGSKHRGGLTSSLTAEEDDSSESRGVSST
SRLAARVPSGISRDQKCILDRIVESHRRYRTQDNVQYRVSEWLSVGHGDKMSDLTSSQCQ
RLLQFLKSVPGFEYLDCTDQNTLLSSASVEIMFLLSAQQFTESPSACNAALYPVNISISN
HGWMKAIDPKDRGSSVAVSEASEDLLAPVLNFFHSMASLGVTEAEYALLTATSILCSDRP
LLRAVDRVESLQEHVLDLLSRLCSNQSPGRDLRRFARLLGRLTELRTVCHNHITVLPQQT
WHM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtggactgaagcagagatggccatgtcaggcggcagctacctgtcctctgac
ggctacagcatctccgagccactgcagtactatgatgttcttgtggatccgctgggttac
cctttccaggagtccgagcttccggccttcccgttcagccagcagcagtacaaccccgtc
aacgttcagttctccgtctacggacctccgaacacgcagccctgcagcgccccctacccc
tgcggctccccgggccccgacttcaactgtgaccctgacctggaagtagttccggcccag
ggacgggccatgttgagcgggcaccccctgatgaagaggcccaggttgggcccgggggct
cgggtgaggggtcaggatgagctgtgtgtggtgtgtggggacaaggcctcagggtaccac
tacaatgccctcacctgtgagggttgcaaaggcttcttcaggcgcagtgtgaccaagaag
gcggtgtaccgctgcaagagtggcgggacctgtgagatggacatgtacatgcgccggaag
tgccaggactgccggctgaggaagtgccgcgctgttggcatgctggccgaatgtctgctg
acggaggtgcagtgccagtcgaagaggctgaggaagggcagcaaacacaggggaggcctg
acctccagcctcaccgcagaggaggacgacagctcagagagccgcggggtcagctccacc
agcagactagcagcacgggtgccctctgggatatcgagagaccagaagtgtatactagac
agaattgtggagtcccatcgtcgatacaggacacaggataacgtacaatatagggtgtcc
gagtggttgagtgtggggcacggggacaaaatgagtgatctgacctcatcccagtgtcag
aggctgctacagttcctcaagagtgtgcctgggttcgagtacctggactgcacagaccag
aacacacttctctccagtgcctctgttgagatcatgttcctgctctctgcacagcagttc
acagagagcccatcggcgtgtaatgcggcactttaccccgtgaacatcagcatctcaaac
catggttggatgaaagccatagatccaaaggacagaggcagcagtgtggctgtttcagag
gcgagtgaggacctgcttgctccagttctgaacttcttccatagcatggcatctttagga
gtgacagaggctgagtatgcacttctcacggctacatcaattctgtgttcagacaggcct
ctgctgcgagcggtggatcgagtggaaagcctccaggaacacgttcttgacctgctgtct
cgactctgctccaaccagagcccgggtcgcgacctccggcgctttgccaggttgctggga
aggctgacggagttacggacggtctgccacaaccacatcaccgtgctgcctcagcaaacc
tggcacatgtaa
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