Clupea harengus (Atlantic herring): 105889823
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Entry
105889823 CDS
T09045
Symbol
cmtr1
Name
(RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X2
KO
K14589
cap1 methyltransferase [EC:
2.1.1.57
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889823 (cmtr1)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.57 methyltransferase cap1
105889823 (cmtr1)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
105889823 (cmtr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
G-patch
WW
mRNA_cap_enzyme
G-patch_2
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
105889823
NCBI-ProteinID:
XP_012671206
Ensembl:
ENSCHAG00000014610
UniProt:
A0A6P3VH21
LinkDB
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Position
15:complement(7534477..7550771)
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AA seq
833 aa
AA seq
DB search
MIKRKFVAAEEPSEKKKQRRDEASSDEESAQHTTSQDSSQSDSMSDAEEARPSFSRPLQS
QESDGQADADADADAANKFAMYNSVSQKLMAKMGFREGEGLGKFGQGRKEIIEASTQRGR
RGLGLTLKGFQGELNVDWRDEPAPSATEPVEWFPESSTEIPDSDELKDWMHIGERKLKIE
DETEFCSENLLDLVLRCKSVFDNLEGEEMRRARTRSNAYETIRGAFFLNRAAMKMANMDH
VFDYMFTNPKDSQGKPLTRDKEGELLYFGDVCAGPGGFSEYVLWRRKWHAKGFGMTIRGP
NDFKLEDFYAAPSELFEPYYGEGGVDGDGDITRPENITAFRNFVLENTERRGLHFLMADG
GFSVEGQENIQEILSKQLLLCQFLTALSVLRTGGHFVCKTFDLFTAFSVGLVYLLYLCFD
RVSLFKPITSRPANSERYIVCQSLKPGSDAVREYLFTVNIKLNQLRHKDSDVNEVVPLDI
IRSDTDFFHHMIRSNESHCAVQVKALAKIHAFVLDNTLSEPRQADIRKECLKTWGVPDKA
RVAPGHPDPKSKFYELMKGSDMEWLSLKPTPLTSTTLDKVAHVLDHRCIVGGGEQLFLLS
LGRSQIYTCDGRMPLRWRKLETVNKLELPRDTLLSVEIVQELKGEGKAQRRINAVHVLDA
LVLNGTDVRVQHFNQRIQMVEKFVKAVSKPSRPDMNPIRVKEVYRLEEMEKIFVRLEMKV
TKGSGGMPRLSYTGRDDRHFLPSGLHIIKTVNDPWTMAYSKSSKRKYFYNKATSVSTFDL
PPDSVAPFHVCHKERIFWAWEEGVKVHDSQTRVDPEKLSKEHLLEFIHQHYQH
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacggaaatttgtggcggccgaggagccgtcggagaagaagaagcagcggcgg
gatgaggctagctctgatgaggagtcggcgcaacacaccaccagccaagactccagtcag
agtgactccatgagcgatgctgaggaggccaggcctagcttttccagacccttgcagagc
caggagtcagacggccaggcagatgcagatgcagatgcagatgcagccaacaagttcgcc
atgtacaacagtgtctcgcagaagctcatggctaaaatgggtttccgtgagggcgagggc
ctgggaaagttcggccagggtcggaaggagattatcgaggcgtctacccagcggggaagg
aggggtctggggctgacactgaaaggcttccagggggaactcaacgtggactggcgggat
gaaccagcgcccagtgcaacagaaccggtggagtggtttccagaaagttccacggagatt
cctgactccgatgagctgaaagactggatgcacattggagagaggaaactgaagattgag
gatgaaacagagttctgctctgaaaatcttctggacctcgttctccgctgtaagagtgtg
tttgataatttggagggagaggagatgaggagagcacgtacccgctccaatgcttacgaa
accatcagaggtgcattcttcctcaacagagctgcaatgaaaatggcaaatatggaccat
gtctttgactacatgttcaccaacccaaaggactcgcaagggaaaccactaacacgggat
aaggagggggagctgctgtatttcggtgacgtgtgcgcgggacccggcggcttctcggag
tacgtgctctggaggaggaagtggcacgccaaaggctttggcatgaccatcagaggaccc
aacgacttcaaactggaggacttctatgcagcgcccagcgagctcttcgagccctactac
ggtgagggaggggtggatggtgatggtgacatcacacggccagagaacatcaccgcattc
cggaactttgtcctggagaacacagaacgccgcggcctgcactttctcatggcagatgga
ggcttctctgtggagggtcaggagaacatccaggagatcctcagcaagcagctcctcctc
tgccagttcctcacggcgctgtctgtgctcagaacgggtggccatttcgtgtgcaagacc
tttgacctgttcacagccttcagcgtggggctggtgtacctgctgtacctctgctttgac
agggtgtccctcttcaagcccatcaccagccggcctgccaactccgagaggtatattgta
tgtcagagcctgaagccggggtctgatgctgtgagggagtacctgttcaccgtcaacatc
aagctcaaccagctgcgacacaaagactctgacgtcaacgaagtcgtcccactggacatc
atcagatcagatacagacttctttcaccacatgatccgctcgaacgaaagccactgcgca
gtacaggtgaaagccctggctaaaatccacgccttcgtattagacaatactctgtcagag
cctcgtcaggctgacatccgtaaggagtgcctcaagacatggggggtccctgataaagcc
agagttgctccaggacacccagatcccaaaagcaaattctatgaactaatgaagggttca
gacatggagtggctgagcctgaagccgacccccctaacctccaccacactggataaggtt
gcgcatgtgctggaccacaggtgcattgtgggaggaggcgagcagctgtttctgctatcg
cttgggaggtcccagatctacacatgtgacgggcgcatgcccctgcgctggaggaagctg
gagacggtcaacaagctggagctgcccagggacacactactgagtgtggagatcgtccag
gagctcaagggggaggggaaagcccagcgaagaataaatgcggtccatgttctggatgca
ttggtgttgaacgggacagacgtgagagtgcagcacttcaaccagcggatccagatggtg
gagaagtttgtaaaggctgtatccaaacctagcagacctgacatgaaccccataagggtg
aaggaggtgtacaggctggaggagatggagaagatctttgtcagattggagatgaaggtg
actaagggttcgggagggatgccccgtctgtcatacacgggccgagacgaccgccacttc
ctgcccagtggcctccacataatcaagactgttaacgatccctggacaatggcttacagt
aaaagctcaaagaggaagtacttctacaataaagccacaagtgtttccacctttgacctg
ccacccgattcagtcgcccccttccatgtctgccacaaggagcgaatcttctgggcatgg
gaggaaggggtcaaagttcacgattcccagacaagggttgaccctgagaagctttccaaa
gagcacctgctggagttcatccaccaacattaccagcactaa
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