Clupea harengus (Atlantic herring): 105889835
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Entry
105889835 CDS
T09045
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105889835 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105889835 (si:dkey-119f1.1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Tup_N
AAA_13
AAA_29
DUF745
APG6_N
Seryl_tRNA_N
AAA_21
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-GeneID:
105889835
NCBI-ProteinID:
XP_031437690
Ensembl:
ENSCHAG00000016103
UniProt:
A0A6P8GJT7
LinkDB
All DBs
Position
15:8088010..8104872
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AA seq
1094 aa
AA seq
DB search
MSKRKSESTRESQHKRLRSSQPDEDDEEEEFALTLTSQPEADPLPSVCTAGDVGIVESIT
LKNFMCHAHLGPFTFGPNVNFVVGNNGSGKSAVLTALIVALGGNAQTTNRGSSLKCFVKE
GESSAEVSITLRNRGNDAFKPQVYGQAITLDLRISSEGLRTYKLRSKTGQLISSKKEELI
SLLDYFNVQVDNPVSILTQEMSKHFLHSKGETDKYKFFMKATQLEQMNEDYDYIIKTQAL
TQNTVDQHEEISEELKRTLKEKEERYKSLASLEDMDKKLDELKNQMAWALVNEMEKEMKP
IGDRVETEERSTPKYNQKVDEWKAKVEEAERKYRQQHEQLEQVTERLQQLQPQGTQLKGD
IQERSRAVKTSEASYHKLKTNQRDLEKDREQLTKRINELKLSISQASAADSQASAARIAG
LQLELEDLGHRDSTLAQQLDQFQQAITTAKDNLDKMRREEQDLQRSCQSKEQSLRQMEAG
RSNRIRRFGEHMPALLNAIDEAYSKGMFQKKPVGPLGYCIRLKDSSLALAVESCLKSLMM
AFCCDNHRDERHLQALTMRYLKDKRPTIIVSQFSDAPYNITQRAVNHPEYPSVLQALEID
DPNVANCLIDMRGIETVLIIKNKADARRVMQQSRPPQNCREAFTGTGDQVFTNRYYSNDS
HSRALFLSGDVEEEIRHLKAALDNQQENLSRLHQHKQTQDSQVQQNNALLKTTYEERTKV
KSQSRRLQQEISELQNVEEPQSEDLVPLEDELEEIREKLSMSDQMCAEAKEKLTQLLSAA
AEADQNYRQHRELISSAAEEAEPIREELSKWDQEVEKSKHHRKHYEEKLKAHINNIQALK
NNLKQKERELTESIAKASEICPERLEIRRTAKSLDLEITRMRTIINTQQQQQGDRELIIR
QYQEALQKYNTTLREVKTLKKFIEVITELIQKRQRAYAKLRGFYSLRCKYYFDMTLAQRG
YTGHMNFDHKNKTLSIVVQPGGKNKASLTDMRSLSGGERSFSTVCFVLSLWSITESPFRA
LDEFDVYMDMVNRRISMDMFLKVASSQRYRQFIFLTPQSMSSLPANNLIRILRLSDPDRN
QTILPFGQRNYPDD
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgtaagagtgagtccacgagagagagccagcacaaaaggttgcggtcttct
cagccagatgaagacgacgaggaagaggaattcgccttaacgttaacttcacaacctgaa
gctgatccgttgccctcagtctgcacggcgggagatgtgggcatcgtagaaagcatcaca
ctgaagaacttcatgtgccacgcacatcttgggcccttcacgttcggaccgaacgtcaac
tttgtagtcgggaacaatggaagtgggaagagcgctgtgctcacagcactgattgtggcc
ctgggagggaacgctcagaccaccaacagaggctcttcacttaaatgcttcgtcaaggag
ggagaaagctctgctgaagtgtccattacactgagaaacagggggaatgatgcctttaag
ccacaagtctatggccaggccatcactttggatctgcgcatctccagcgaaggtctcagg
acatataaactccgcagtaaaactggtcagttgatttcttccaagaaggaggagctgatc
tctctgctggattacttcaacgtccaggtggacaaccctgtgtccattctaactcaggag
atgagcaagcacttcctacattcgaaaggggaaacagataaatacaagttcttcatgaag
gccacccaactggaacagatgaacgaggactacgactacatcatcaagacccaggcgctg
acccagaacacagtggatcagcatgaggagatttcggaagagctgaagagaacgctcaag
gagaaggaagagaggtacaagagtttggcctcacttgaggacatggacaagaagttagac
gagctcaagaaccagatggcctgggcgttggtaaatgaaatggagaaggagatgaagcct
attggcgatcgggtggagactgaagaaaggtcaacaccaaaatataaccagaaggtggac
gagtggaaggcaaaggttgaggaggcggagaggaagtaccgtcagcagcacgagcagctg
gagcaggtgacggagcgcttgcagcagctgcagccgcagggcacccagctcaaaggtgac
atccaggagcgcagccgggcagtaaagacttcagaagccagctaccacaagctgaagacc
aaccagcgtgacttggagaaggacagggagcagctcaccaagcgcataaatgagctcaaa
ctcagcatcagccaggcatctgctgcggacagccaggcctctgcggcgcgcatcgcgggg
ctgcagctggagctggaggacctggggcaccgcgactccaccctggcccagcagctggac
cagttccagcaggccatcaccaccgccaaggacaacctagacaagatgagacgcgaagag
caggacctccagcgctcctgtcagtccaaggagcagagcctgcgtcagatggaagccggc
cggtccaatcgcatccggcgctttggggagcacatgcctgctctgctcaacgccatcgac
gaggcctacagcaagggaatgttccagaagaaacctgtcgggccactgggttactgtatc
cgtctgaaggactcatctctggctctggctgttgagagctgtctgaagagtttgatgatg
gccttctgctgtgataaccatagagatgagcgccacctacaggcactcacaatgagatac
ttaaaggacaagagacccaccatcatagtcagccaattcagcgatgcaccctacaacatc
acccaaagggctgtcaatcacccagagtaccccagtgtgctgcaggccctggagattgac
gacccgaacgtggccaactgtctgatcgacatgagggggatcgagaccgtactgatcatt
aagaacaaagcggacgccagaagggtgatgcagcagagccgaccgccccagaactgcagg
gaggccttcactgggacgggggaccaggtgttcaccaaccgatactactccaacgactca
cactccagggcactgttcctcagcggagacgtggaggaagagatcaggcatctgaaggcg
gcccttgacaaccagcaagagaatctgtcacgtctccatcagcacaagcagactcaggac
tcccaggtccagcagaacaacgccctgctcaagaccacctacgaggaacgcaccaaagtc
aagagccagtccaggaggttgcagcaggagatcagtgaactgcaaaatgttgaggaacct
caatctgaggacctggtgccactggaggacgagttggaggagatcagggagaagctgtcc
atgtccgaccagatgtgtgcggaagcaaaggagaagctgacgcagctactcagcgccgca
gcggaggcggaccagaactaccggcaacaccgggaactcatcagcagcgccgcagaggag
gccgagccaatcagggaggagctgagcaaatgggatcaggaggtggagaagtctaagcac
cacaggaagcactatgaggagaagctcaaagcccacatcaacaacatccaggccctgaaa
aacaacctaaaacagaaagagcgggaactcacggagtccatagcaaaggcctcagagatt
tgtccagagcgtctggagataaggaggacagcgaagagcctggacctggagatcacgcgc
atgcggaccatcatcaacacccagcagcagcagcagggggaccgagagctcatcatcagg
caatatcaggaagccttacagaagtacaacactactctcagggaagtgaaaacccttaaa
aagttcatcgaggtgatcacagaactcatccaaaaaaggcagagagcttatgccaagctg
agaggtttctactccctgcgctgcaagtactactttgacatgaccctggctcagagagga
tatactggccatatgaacttcgaccacaaaaataaaacgctctccatagttgtccaacct
ggaggcaagaataaggcgtctctgacggacatgcgttctctctcggggggcgagcgctcc
ttctccaccgtctgcttcgtcctctcgctctggtccatcacagagtcacccttccgcgcc
ctggacgagtttgacgtctacatggacatggtcaaccggaggatctccatggacatgttc
ctgaaagtggcttccagtcagcgctacagacagttcatcttcctcacgccccagagcatg
agttccctcccggccaataacctgatccgcatcttgcgtctgagtgaccccgaccgcaac
cagaccatccttcccttcggccagcgcaactaccccgatgactag
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