Clupea harengus (Atlantic herring): 105889849
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Entry
105889849 CDS
T09045
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 6
KO
K08399
leucine-rich repeat-containing G protein-coupled receptor 6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105889849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
char04030
]
105889849
G protein-coupled receptors [BR:
char04030
]
Rhodopsin family
Others
R-spondin
105889849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_EndoS
LRR_LRWD1
LRRNT
LRR_R13L1-DRL21
LRR_Zer-1
LRR_6
Motif
Other DBs
NCBI-GeneID:
105889849
NCBI-ProteinID:
XP_012671233
Ensembl:
ENSCHAG00000001142
UniProt:
A0A6P3VGH4
LinkDB
All DBs
Position
4:complement(18375720..18436925)
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AA seq
952 aa
AA seq
DB search
MLALLLMLQFASSVQAHGTQSATLPASLYPAPCQCQEDGILLIVDCSELGLSAVPGNLSP
LTSYLDLSMNNISEIQPNSFHNLHFLSELRLSGNHLRHIPGPVFQGLYNLKVLMLQNNQL
ERLPSEEPWDLPNLLSLRLDANLIVEVPPQTFSGLRSLRHLWLDDNALTEIPVGALNNLA
SLQAMTLALNRISHIPDNAFRNLSNLVVLHLHNNMIKTLGQNCFEGLYSLETLELNYNEL
QEFPVAIRTLAKLQELGFHNNNIKAIPERAFVGNPLLQTINFYENPIQFVGRSAFQFLPK
LHTLSLNGATEIQEFPDLKGTTSLEILALTRAGLTTLPQSLCQQLPNLRSLELSHNQIEE
LPSFCHCKSLQEIGLQHNLIRQIEANTFQQLSSLRSLDLSWNKIETINPEAFSSLHSLVK
LDLTENQLSALPMVGLSSLTHLKLRGNMALSSSFRQEDFPKIRVIEMPYAYQCCVYGSCS
SHKSLNQWDTEQMSEDDDLHKRTIALFPIHADSNYDLDMEEFQLEIEESKLQTSIQCTPL
PGPFKPCDYMFDSWVVRLGMWAIALVSLVGNGLLIISVFGSPTYLSPVKFVIGAIGGANL
LTGLCTGTLAMVDVLTFGQFSQHGARWESGTACQTTGFVSIFASEASILFLTLAAVQCSV
SVSCVRAYGKSPSFSSVRAAAVACVLLSVAVAALPLVKVGEYGASPLCLPSPLPEGRPST
LGFMVALIMMNSLCFLIITGTYIKLYWDLMKGEFDSIWDCAMIKHVAWLIFTNCLLYCPV
AFLTFSSLLGLFPVAEEVIKSVLLVVLPLPACLNPLLYLLFNPHFREDARLFWSRSKLSP
EEILDSFVSMETEKSSYDSTQALVSFAEVDTLFDSSALPKMEAEDRYPWSPSVPLIPCQQ
KVLPMGRECIAGSITGMCLNEEECLRVNGLDSINGSSFPTGVCHSSPIASHL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttggcattactcctgatgctgcagtttgccagcagtgtgcaggctcatgggacccag
agtgccactctgcctgccagtctgtacccagcgccatgccagtgccaggaggatgggatt
ctactcattgtcgactgctcggagcttggactatcggcggtgcccggcaacctcagccca
ctgacgtcctacctagatctcagcatgaacaacatcagtgaaatccagcctaattcattc
cacaacctccactttctgtcagagctgcgtctctccggcaatcacctgagacacatcccc
ggaccggtgttccaaggcctctacaacctcaaagtcctgatgttgcagaataatcagctt
gagcgcctacccagtgaagagccatgggatttgcccaacttgttgtccctgcgtctggat
gccaacctgatagtggaggtccctccacagaccttctctggcctccggtccctccggcat
ctttggctggatgacaacgcgctgacggagatcccagtgggtgccctcaataacctggcc
tccctgcaggcgatgaccctggcactcaatcgcatcagccacatccctgacaacgccttc
cgcaatctctctaacctggtcgtgctgcatcttcataacaacatgatcaaaaccctggga
cagaattgctttgagggactgtacagcctagagactctggagctgaactacaatgagctg
caagagttccccgtggctattcggaccctggcgaagcttcaggaactgggattccacaac
aacaatattaaggccatcccagaacgggcttttgtgggaaacccactgctacaaaccata
aatttctatgagaatccaatccagtttgtgggcagatctgctttccagttcttaccaaag
ttacataccctctccctcaatggagccacggaaattcaagaattccctgacctgaaagga
acaaccagtctggaaatactcgccctcaccagagctggcctcaccaccctaccccagagt
ctctgccagcagctgcccaacttaagatcgcttgaactgtctcataatcagattgaagaa
ctcccaagcttttgtcactgcaaatcactccaggaaataggactacagcacaatctgatt
cggcagatcgaggcgaacacattccagcagctctcctccctacgctcactggacctcagt
tggaacaagatagagacgattaacccagaagccttctcatctctgcactctctggtaaaa
cttgacctgacagaaaatcagttaagtgcgttgcccatggtgggactgtccagccttaca
cacctaaagctgagaggaaacatggccctctccagttctttcagacaggaggatttcccc
aagataagggtgattgaaatgccctacgcctaccagtgctgtgtgtatggctcctgcagc
agccacaagtccctcaaccaatgggatactgagcaaatgagtgaagatgacgacctgcat
aagaggaccatagctttatttcccatccatgccgacagcaactatgacctcgacatggag
gaattccaattagaaattgaagaatccaaactacaaaccagcatccagtgcacaccactc
ccaggtcccttcaagccttgcgactacatgtttgatagctgggttgtgcgcttgggaatg
tgggccatcgctctcgtctccctcgtgggcaacggcctgctgatcatcagcgtcttcggg
tcgcccacctacctctccccggtcaagtttgtcatcggcgccatcggcggggccaacctc
ctgaccggtctgtgcacgggcacgctggctatggtggacgtgctgacctttggccagttc
tcacagcacggtgcccgctgggagtcaggcacggcctgccagaccacgggcttcgtctcc
atcttcgcctctgaggcgtccatcctcttcctgacactggcggccgtccagtgcagcgtg
tcggtgtcgtgtgtgcgtgcctacggcaagtcgccgtctttcagcagcgtgcgggcggcc
gccgtcgcctgcgtgctgctctccgtggccgtggccgccctgccgctggtgaaggtcggt
gagtacggtgcgtcgcccctctgcctgccctctcccctgcccgagggtcgtccatccaca
ctgggcttcatggtggccctcatcatgatgaactccctctgcttcctcatcatcaccggc
acctacatcaagctctactgggacctgatgaagggcgagttcgacagcatctgggactgc
gccatgatcaagcacgtggcctggctcatcttcaccaactgcctgctctactgccccgtg
gccttcctgacattctcctcactgctgggcctcttccctgtggccgaggaggtcatcaag
tccgtgctcctggtggtgctgcccctgccggcgtgcctcaacccgctgctctacctcctc
ttcaacccccacttccgcgaagatgccaggctcttctggagccggtccaagctgtccccg
gaggagatattagattcgttcgtgtccatggagaccgagaagagttcctatgactccaca
caagccctggtgtcctttgccgaggtggacaccctgttcgactcctctgccttgcccaag
atggaggcagaggaccgctacccctggtcaccctccgtgccgctcatcccctgccagcag
aaggtgctgcccatgggcagagagtgtattgctgggtctatcacaggaatgtgccttaat
gaggaggagtgtttgagagtcaatgggctggacagcatcaatggcagctccttccccact
ggagtatgtcactcatctcccatcgcatctcatttgtaa
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