Clupea harengus (Atlantic herring): 105889881
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Entry
105889881 CDS
T09045
Name
(RefSeq) calcium-activated potassium channel slo-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
105889881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105889881
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
105889881
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GFIT
Motif
Pfam:
Slowpoke_C
Slo-like_RCK
BK_channel_a
Motif
Other DBs
NCBI-GeneID:
105889881
NCBI-ProteinID:
XP_031427054
UniProt:
A0A6P8FLH9
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Position
7:complement(9647676..9662176)
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AA seq
614 aa
AA seq
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MSTQLPRRDDLHQADLGSQGHGTSAYLQNVSNWEWSRGDGVICLAELKLGFMAQSCLVPG
LSTLLANLFSMQGGPLEADDHSWRKFYREGMYKEIYTEYLSSTFTGLSFAQASKLCFLKL
NLSLIGIEYQSGETEFCVLVNPPSHIRIKNKTLGFLIAEDAADAHRAGFYCWVCHNHIDD
ISRMKPCKCENVTTASSSLLSLNVRQPSLGVLPQCQEPELDEYTSGLELEEDVMLDSTGM
FHWCSPIPLQEVSLTREKASVLPLRQHVVVCLVGDEDSRLLGLGDFMMPLRASNFTVPEL
KTVVFLGDPKYFRREWSNIQYFPKIYFLSGSPMCKADLRAVRVETCAMCVVLSTLSSNKN
IESTMQDKETILSCVNLFHTRFSYQPSRPQSQHGRRSSYTPLGPRPPDASPPPQPPRTGT
TVPLLVELVNTSNVQFVSDVEEFNKSSNMTLTEAFAIGSVFSMDLLDSLMSATYFNANVP
NLINTLVTGGDTPALEAQLAEDNHLCQGEMNLTLCTLRQRSKLAQLALDDEPLCRLRCMV
YKDLFVQALDSLEILCFGLYRLMDPPNPSMKRFVITTPPAELPLDPSDKVYCSVPFHQSH
LLARSRSRSSVQSL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcagctccctcggcgcgacgatctgcatcaagctgatcttggatcacaaggt
cacggcaccagtgcttacctgcagaacgtgtccaactgggagtggagcaggggcgatggt
gtcatctgtctagccgagctcaagctgggcttcatggctcagagctgccttgtgccgggg
ctctccactctcctggccaacctcttcagcatgcagggtggcccgttggaggcggacgat
cattcctggcgaaagttttacagagagggcatgtacaaagagatttacactgaatacctt
tccagcaccttcacaggcctctcatttgcacaagccagcaagctgtgtttcctgaagctg
aatttgagtttgatcgggatcgagtatcaaagtggagaaacagagttctgtgttttagtg
aatcctccgagccatatccggataaagaacaaaaccctgggatttctcattgcagaggat
gcagcagacgcacacagagccggcttttactgttgggtttgccacaatcacattgacgat
atctccagaatgaaaccgtgcaagtgtgagaatgtgactacagcctcatcatcgctcctg
agtctgaatgtgagacagccatctttgggagttctcccccaatgtcaggagccggagttg
gatgagtatacctcgggcttggagctggaagaggacgtgatgctggactccactggcatg
ttccactggtgcagtcccatcccattacaggaagtctcactgaccagggagaaggcgtct
gtgctgcctctgcgccagcatgtggtcgtgtgtctggttggggatgaagactccaggctg
ctgggcctgggggacttcatgatgcctctgagggccagcaacttcaccgtccccgagctc
aagaccgtagtcttcctgggggaccccaagtacttcagaagggagtggtccaatatccag
tacttccccaagatctactttctatctggctctcctatgtgcaaggccgacctgcgagcg
gtgcgggtggagacctgtgccatgtgtgtggtcctcagcaccttaagcagcaacaagaac
attgagtcaaccatgcaggacaaggagaccatcctgtcctgcgtcaacctctttcacacg
cgcttcagctaccagccctcccgcccccagagccagcacgggcgccgcagcagctacacc
cccctaggacctcggccaccagatgcctctccaccaccacaacctccaaggacaggaacc
acagttcccctgctggtagagctcgtgaacacctccaacgtgcagtttgtgagtgatgtg
gaagagttcaacaagtcctccaatatgactctaacagaggcgtttgccatcggctctgtg
ttctctatggacctgctagactctctcatgtcagctacgtacttcaatgccaacgtgccc
aacctgatcaacacactggtgacggggggagacacacccgcactggaggcacagctggcg
gaggacaaccatctgtgccagggcgagatgaacctgacactgtgcacgctgcgtcagcgc
tccaaactggcacaattggcgctggacgacgagcccctctgccgcctacgctgcatggta
tacaaagatctcttcgtccaggctttggactcactggagatcctgtgttttggactctac
cggctgatggatcctcctaacccttctatgaagaggtttgtgatcaccactcccccggcg
gagcttcccctagatccctcggataaggtctactgctcagtgcccttccaccagagccac
ctgctcgccaggtcaagatctcgcagttccgtccagagcctctga
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