Clupea harengus (Atlantic herring): 105889914
Help
Entry
105889914 CDS
T09045
Name
(RefSeq) deoxyribonuclease-2-alpha-like
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome
char04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105889914
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
105889914
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
105889914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNase_II
INT1_R3
Pax2_C
Motif
Other DBs
NCBI-GeneID:
105889914
NCBI-ProteinID:
XP_012671302
Ensembl:
ENSCHAG00000027856
UniProt:
A0A6P3VG41
LinkDB
All DBs
Position
7:6626990..6630766
Genome browser
AA seq
379 aa
AA seq
DB search
MFAVPLALLLLLYQALEGSAGPITCYDDLGKAVDWFYVYKLPHHESRLEGLKYLFMNKVS
GGWTDGKVLVNDSAGALGRTVGQLYTSTEQGYILYNDQPPTPVPGTGRAGNVGRSGGHTK
GVVLFDKKQGYWLVHSTPHFPPPKKVGQFSYPDTGIVNGQNFICVTYPLDRFQTIGEQLQ
INQPHIFDCHIPASLSSSVQSMVQLCKQSQQEGGNVSLLQDASKITNRSIALTSLGGTKF
INFAKGASFADDLYHSWVAPALQSDLLVQFWQRSTGILPSDCSPSWKVLNIQELAPGQRF
TFKATEDHSKWAVSTKAAVGSAGGWVCVGDINRNKAEEKRGGGTVCLQDPIVWKAYRTTA
LKCASCEGGQCDCVTTAGR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgttcctctcgccctgttgctgctgctttaccaagcgctagaggggagcgca
ggcccgattacctgctatgatgacttggggaaagctgttgactggttttacgtctataaa
ctccctcaccatgagtcccgtttagaggggttgaagtatcttttcatgaacaaagtgagt
gggggatggacagatgggaaagtactggtgaacgacagtgcaggagccttgggaaggact
gttggacaactatacacgagcactgagcagggctacatactgtacaatgatcagccaccc
acaccagtgccagggactggaagagctgggaatgttggcagaagtgggggtcataccaaa
ggcgttgtcttatttgacaaaaagcaagggtattggctggtccacagcacaccacatttt
ccaccacccaagaaagtcggacaattttcgtacccagacactggtattgtgaatggtcag
aacttcatctgtgtcacctaccctttggatcgcttccagactataggggaacagctacag
attaaccagccacacatctttgactgccatattcccgcttccctcagctcctctgtacaa
tccatggtccagctgtgtaaacagagccagcaagagggagggaatgtcagtcttctacag
gatgcctccaaaataaccaatcgcagcatagcactcacgtctttgggtgggaccaaattc
atcaactttgccaaaggagcatcctttgcagatgatctctatcactcctgggtggcccca
gctcttcagtcggacctgctggttcagttctggcagcggtccaccgggattctgccctca
gactgctccccgagctggaaggtgttgaacatacaggagcttgcccccgggcagaggttc
acgttcaaggctacagaggaccactccaagtgggcagtcagcactaaggctgcggtcgga
agtgcaggtggctgggtctgcgtgggagacatcaaccgcaataaggcagaggagaagaga
ggtggagggactgtgtgtctccaagaccccattgtgtggaaagcctaccggaccacagcc
ctgaagtgtgcctcctgtgagggaggccaatgtgactgtgttacaacagcagggagatag
DBGET
integrated database retrieval system