Clupea harengus (Atlantic herring): 105889922
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Entry
105889922 CDS
T09045
Name
(RefSeq) protein unc-13 homolog B isoform X6
KO
K15293
protein unc-13 A/B/C
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105889922
Membrane trafficking [BR:
char04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
105889922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
RINT1_TIP1
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
105889922
NCBI-ProteinID:
XP_031426149
UniProt:
A0A6P8FJJ5
LinkDB
All DBs
Position
7:5838043..5927081
Genome browser
AA seq
2202 aa
AA seq
DB search
MFSRNCFNGQDGVGAPEYGRHKHKAAVPKRRAPNPRVALMIRGKIHRLLQGSGEQASHNP
GPYYDGILEEDEEEEKEGPEPDLRICASQRERYGGASEVANGQVAKEHTALASMDYVGEV
ELNREGCVRIPCTLQHSSSAQQPLRMPKQAMSDFNGSRFLEEMGSDSGTPFSYNSARVDR
IVEEDEEEEEEEESSAIVEHILKELRGINKIQAEISDLRQYLSFVRGSVDEVSSCVEAVL
MEIEGIRSGTKPATDSWPGAVGHNEGPSTLYHEQCSSSYNTRMDKPNKAESSSTASDYRS
EELSVHDSQYKMALNQLLDVRRFGSSYEAMCTSSNVDSPNPDVHGPPELEMFNQSSDIHP
GIRVRKLSFGYLERQDGQDPAPSTSSLSSGHSSKSESDHHDRMESGCPGAAPECHGWNQM
GLPRSTSGDTGWSEEECYFRQASFEDGDGCIEEGQTWEGCRDEEAGSTLGRSSACSSEHL
SFVSSCHYNSPASTGSREEWLGSKRRAHTNETQAMGRSAKDLILECGGSAHYNPAVMYES
EIEDYANSGDVSHEITGTAINQNRNNALSSDHPSYHQALLMEHSHSEGAAQQAPTLEKVE
RGVAISDPSVSSFAPDPTDACNAGFTVKRFGRAVLDFKSVLRVALKKLEGSQSPGDKTEV
PLASSPSSETLIVTPCAATPDGGSVVPEGICSSPILTDLTCTESESVAQPACEVFQEQGT
DPPEELESAGADPPYSVALASSPQDGSPPPCVVPESVPPTAEDPAQHEEENVLQPPEEIP
LDADVKIPKGVGAEISENVGTDSTESVSADMNAEAGADTSADATETENSEDANVDSILVD
QGEETDCPQEMSQRDVRRLKCMRTFQQILREKRETRRNLTLITMSTFSEDDFNPEASQEE
DQSQENGDPGRQALAKPGGGGTFGIDSMPDLRKRKHIPLVSEVAMSLVQSRKAISHGISR
ALAARSSLKDEELKSHVYKKTLQALIYPISCTTPHNFEVWTATTPTYCYECEGLLWGIAR
QGLRCAECGVKCHEKCQELLNADCLQRAAEKSSKTGAEDRTQHIITAMKDRMKIRERNKP
EIFETIRTIFGITKLLHAQQMKTIKQAVLDGTSKWSAKITITVVSAQGLQAKDRTGTSDP
YVTVQVGKTKKRTKTIYGNLNPVWEEKFHFECHNSSDRIKVRVWDEDDDIKSRVKQRLKR
ESDDFLGQSIIEVRTLSGEMDVWYNMEKRTDKSAVSGALRLQISVEIKGEEKVAPYHVQY
TCLHENIFHYLTETEGQGVPKIPVARGDDAWKVYFDEIEQDIVDEFAIRYGIESIYQAMT
HFSCLSSKYMLPALPAIMSTLLANINAFFAHPTSANNVSACDRFAASNFGKDRFVKLLDQ
LHNSLRIDLSTYRNNFSASSKPRLADLKSTVDLLTSITFFRMKVLELQNPPRAAHVVRDC
VKACLNSTYEYIFNNCQELYNRQFQPAVEPEKPKEEKKKEEKNESDSDEEEEEEKKEKEK
EEEKAPPEEPGPSIQNLDFWPKLITLIVSIIEEDKTAYTPVINQFSQEMNVGKVSAEVMW
MLFAQDMKYALEVFDRIDHNRWKNAPVTIHIRRLDFYAEHENHKLCRSADYMNLHFKVKW
LYNEYVKDLPAFQDSVPEYPAWFLQFVLQWLAENEDVSMDFMHGALERDKREGFQATSEH
ALFSSSVVDIFTQLNQSFEIIKKLDCPDPVVMGHYNRRFAKTITKVLLQYCAILSKSFPS
YCEKEKIPCVLMNNVQQMRVLLEKMFEFMGAKQEKEKEKQEDGGSKQKEAAANTKKLDPE
AAEILNDLQLKLNTVLDNLSAMFGKSFQARIHGFMRQVAELLYQIKGPLNANARNSAEAD
ADNVLRPLMEFLDANLSIFADMCEKTVLKRVLKDLWRIVLTSMEKTIVLPQSNESLGAQL
LTAATKLSNLKGGGEAKSLSPRHCAIMEVGLDTIKAFFHAGGNGLKKAYLEKSSELSSLR
YALSLYTQTTDALIKTFVSTQHAQVHNGMGIRIVPNEKVRPDRPSGVERPVGEAIIQVDM
TPPAGSGEQKFSVKVIAINDMKWQTSGMFRPFVEVNLVGPLLTDKKRKFQTKSKNNSWSA
KYSETFPFVLGRGTSAEFYEVQITVRDYCFGRADRVVGVAVVQLRDVADRRSCVCWCPLG
PRVGMDETGVTALRILSQRPNDEVAKEFVKLKSEIRPAEEGR
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaggaactgcttcaatgggcaggatggcgttggggccccagagtatgggcgc
cataaacataaggcagctgtacccaaaaggagggcccccaatcccagggttgctctcatg
atccgtgggaaaattcatcgccttcttcaggggtctggggagcaagcctctcacaatccc
ggcccatattatgatgggatcttggaggaggatgaagaggaggaaaaggaaggtcctgag
ccagacttaaggatatgtgcatcacagagagagagatatggcggcgcgtctgaagttgct
aatggacaggttgccaaagaacacacagctcttgcaagcatggattatgtaggggaggtg
gagctgaacagagaagggtgtgttcgcatcccgtgtacccttcagcacagcagcagtgcg
cagcagccattgagaatgccaaaacaggcaatgtcagatttcaatgggtcaaggtttttg
gaagagatggggtccgacagtggaacacctttcagctacaattcagccagggtggacagg
attgttgaggaggacgaggaggaagaggaggaggaagagtccagtgctatcgtcgagcac
atcctgaaggaactgagaggaatcaataagatccaggcagagatctcagatttgaggcaa
tacctctcttttgtgcgtggctcagtagatgaggtgtccagctgtgttgaggcagtgcta
atggaaatagagggcatacgctcagggaccaaacctgcaacggactcttggccaggggca
gtggggcacaacgaggggccctctactctctaccatgaacagtgtagcagctcctacaac
acaaggatggataaacctaacaaagcagagtcctcaagtacagcaagtgattatcggtca
gaagaactcagtgtccatgatagtcaatataaaatggccctaaatcagttgttagacgtt
agaagatttggctcgtcatacgaggctatgtgcacctcatccaatgtagattctccaaac
ccagatgttcatgggccacctgagcttgaaatgttcaaccaaagctcagatatccaccct
ggcatcagggtgaggaagttgagctttggatacttggagcgccaggacggacaagaccca
gcacccagcaccagttctctgtcctcgggccatagctccaagtcagagtctgaccaccat
gacaggatggagtcggggtgtccaggtgctgcccccgagtgccatggttggaaccagatg
ggtctccctcgtagcacgagtggcgatacaggctggagtgaagaagaatgttacttcagg
caggccagttttgaagatggcgacggttgcatagaggaagggcagacatgggaggggtgc
agggacgaggaagctggcagcacattggggcgctcatctgcttgcagttccgagcatctg
tccttcgtttcaagttgccattacaactctcctgcgagcacaggcagccgagaggagtgg
ctcggcagcaaaaggagggcacatacaaatgagacacaagccatgggaaggtctgctaag
gacctcattttggaatgcggtgggtctgcccattacaatccagcagtaatgtatgaaagt
gagatagaagattatgccaattctggtgacgtaagtcatgaaattacaggcactgcgata
aatcagaacagaaataatgccctctcctctgaccatccttcatatcatcaagctctcttg
atggaacattcacacagtgaaggtgctgcccaacaggctccaaccttagaaaaggtggag
aggggtgtagccatttcagaccccagtgtgtccagctttgctccagatcctactgatgcc
tgtaatgctggtttcactgtgaaaaggtttggcagagcagtgctggatttcaagtcggtt
ttgagggtggcactcaagaaactagagggatctcaatcacctggggacaagactgaagtc
cccctggcctcttctccaagcagcgagaccctaatagtgaccccatgtgctgccacacct
gatggtgggagtgttgtccctgagggaatctgtagctctccaatattgacagacctgact
tgcactgagtcagaatcagtggctcaaccagcatgtgaggtcttccaggagcagggcact
gatcctcctgaggaactagagtctgctggggcagacccaccgtacagcgttgcccttgcc
tcaagcccccaggatggctctccaccaccgtgcgtcgtacccgagtcagtcccacctact
gcagaagaccctgctcagcacgaggaggagaacgttttgcagcctcctgaggagatccca
ttagatgctgatgtgaaaatacccaaaggtgttggtgcagaaatctctgaaaatgttggt
acagactctactgaatcagttagtgcagatatgaacgcagaagccggtgcggacaccagt
gcagatgcgacggagacggagaacagcgaagatgctaatgtagatagcatcttagtggac
caaggggaggaaacagattgccctcaggagatgagccagagggatgtgcgacggctgaag
tgcatgagaacttttcagcagatcctcagggagaagagagaaacccgtcgtaaccttaca
ctgattacaatgtccaccttctcggaggacgattttaacccagaagcgagccaggaggaa
gatcagagccaagaaaatggagaccccggcagacaggcattggcgaagcctggtggaggt
ggtacatttgggattgacagcatgcctgatcttcgcaagaggaagcacatccccctcgtc
agtgaagtggctatgtccctggtgcagtccaggaaggccatctctcatggaatctctcgt
gccctggctgcccgctcctccctaaaggacgaagaattgaagagtcacgtgtacaagaaa
acgctacaggctctgatctaccccatctcctgcaccaccccgcacaacttcgaggtgtgg
accgccaccacgcccacctactgctacgagtgcgagggcctgctgtggggcatcgctcgc
cagggcctgcgctgcgccgagtgcggggtcaaatgtcacgagaagtgccaggagctgctg
aatgccgactgcctgcagcgggcggcagaaaagagctccaagactggcgctgaggatcgc
acgcagcatatcatcaccgccatgaaggatcgcatgaagatccgtgagcgcaacaaaccc
gagatctttgagaccatccgcaccatcttcgggatcaccaagctccttcacgcccagcag
atgaagaccatcaaacaggcggtcctggatggaacctccaagtggtcggccaagatcact
atcacagtggtgagcgctcagggactgcaggcgaaggacaggacgggaacgagtgacccg
tacgtcaccgtgcaggtggggaagaccaagaagaggacgaagaccatctacgggaacctg
aaccctgtgtgggaggaaaagttccacttcgagtgtcacaactcctcggaccggattaag
gtgcgcgtgtgggacgaggatgacgacatcaagtctcgcgtgaagcagcgcctgaagagg
gagtcggacgacttcctgggccagagcatcatcgaggtccgcactctcagcggggaaatg
gacgtgtggtacaacatggagaaaagaacggataagtctgctgtgtccggggcccttcgc
ctccagatcagtgtggagatcaagggagaggagaaggtggctccctaccatgtgcagtac
acctgcctgcatgagaatattttccattacttgactgaaactgaaggccaaggtgtgccg
aaaatccctgtggccaggggagatgatgcctggaaagtttactttgatgagatagagcag
gacattgtggatgagtttgccattcgctacggaattgagtccatctaccaggctatgacc
catttttcttgcctgtcctccaaatacatgctgccagcgcttccagccatcatgagcaca
ctgctggctaacatcaacgccttcttcgcccaccccacctcagccaacaacgtgtcagca
tgtgaccgcttcgctgcatccaattttgggaaagatcgattcgtgaagctcctggatcag
ctgcacaactccttgcgcattgacctatcaacataccggaataacttctcagccagcagt
aagccccgtctagcggacctgaagtccaccgtggacctgctcaccagcatcaccttcttc
cgaatgaaggtcttggagttgcagaacccccctcgtgctgctcatgtggtgcgtgactgt
gtgaaagcttgcctcaactccacctatgagtacatcttcaacaactgccaagagctgtac
aaccgtcagttccagcctgctgtggaaccagagaaacccaaagaggagaagaagaaagag
gaaaagaacgaaagtgactctgatgaggaggaggaggaggagaagaaggagaaggagaag
gaggaagagaaggccccaccggaggagcccggccccagcatccagaacctggatttctgg
cctaaactcatcactctcatcgtgtccatcatcgaggaggacaagaccgcttacacgccc
gtcatcaaccagttctctcaagagatgaatgtagggaaggtcagtgcagaggtcatgtgg
atgctgtttgcacaggacatgaaatatgccttagaagtttttgatagaattgaccataat
cgctggaaaaatgctcctgtcactatccacatacgcagactagacttttatgcggagcat
gagaatcacaaactctgcagaagtgcggactacatgaatctgcatttcaaagtcaagtgg
ctctacaatgagtatgtcaaagacctgccggctttccaagactcggtcccagagtaccca
gcgtggtttttgcagttcgttctgcagtggctggctgagaatgaggacgtgtccatggac
ttcatgcatggcgcgctggagagagataagagggaggggttccaggcgacctctgagcac
gctctgttctccagctccgtggtggacatcttcacacagctcaaccagagctttgagatc
attaagaaactggactgcccagaccccgtcgtcatgggacactacaaccgacgctttgct
aagacaatcactaaagtgctcctgcagtactgtgccatcctgtccaagagcttcccctcc
tactgtgagaaggagaagatcccgtgtgtcctcatgaacaacgtccaacagatgcgtgtc
ctcctggagaagatgttcgagttcatgggtgccaagcaggagaaggagaaggaaaaacag
gaggacggcggaagcaagcagaaagaagcagccgcgaacactaagaagctggatcccgag
gcagcagagatcctgaacgacctgcagctgaaactcaacactgtgctggacaatttgagt
gccatgtttggaaagagcttccaggccaggatacacggcttcatgcgtcaggtggcagag
ctcctgtaccagatcaaagggcctcttaatgccaacgcacgcaacagcgcagaggccgat
gcagacaacgtgctccgcccactcatggagttcctggatgctaatctgagtatctttgcg
gacatgtgtgagaagacggtcctgaagagagtgctgaaggacctctggaggatcgtcctc
accagcatggagaagaccatcgtcctgccgcagagcaacgaaagcttgggtgctcagctt
ctcactgcagccacaaagctttcaaacctcaagggaggaggggaggctaaaagcctgtcg
ccgcggcactgtgcaattatggaggtgggactggacaccatcaaggcgttcttccacgcg
ggagggaacgggctgaagaaggcgtacttggagaagagctcggagctctcctcgctgcgc
tacgccctgtcgctctacacacagaccaccgacgctctcatcaagacatttgtgtcgact
cagcatgcacaggtccacaatgggatgggcataaggatcgtccccaatgaaaaggtccgg
cctgacagaccctctggggtggagcggccggtgggagaggcaattatccaagtggacatg
acgccccctgctggcagtggagagcagaagttcagtgtgaaggtcatagccatcaatgac
atgaagtggcagacatctggaatgttccggccttttgtggaggtcaacctggtgggccct
ctgctcaccgacaagaagcgcaagtttcagaccaagtccaagaacaacagttggtctgcc
aaatacagtgagacctttccatttgtgctaggtaggggcactagtgccgagttctatgag
gtgcagatcacggtaagggactactgcttcggccgcgccgaccgggtggtgggtgtggcg
gtggtgcagctgcgagacgtggccgaccggcgcagctgcgtgtgctggtgccccttgggc
cctcgcgtcggcatggacgagacgggcgtcaccgccctgcgcatcctctcccagcggccc
aacgacgaggtcgccaaggaattcgtcaagctcaagtccgagattcgccctgctgaggag
ggcagatga
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