Clupea harengus (Atlantic herring): 105889929
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Entry
105889929 CDS
T09045
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105889929
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105889929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
NBCH_WD40
WDR90_beta-prop_4th
HIRA_B
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
105889929
NCBI-ProteinID:
XP_012671317
Ensembl:
ENSCHAG00000026348
UniProt:
A0A6P3VGU7
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Position
7:complement(6453079..6468187)
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AA seq
1007 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMSPVLREEDEKSENIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVMLASCSVDNTIVIWNARKFPEIITALKGHTGLVKGL
TWDPVGKYIASQADDRSLKVWRTMDWQLETNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKHKNGSSQKGSGPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLNGMGIMVCSMDGTVAFLSFNLD
ELGDPLNEEEKNSIHQNIYGKSLAITSVEAQLSTTIIENPEMLKYQPDRQAERASAVLGI
GLETQTTKLTNVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFN
SVPILPGSSMSNQLTPQLSSESNASNSLGLRPLQDTSPGKPSEENKDGATPSTNSIGMKT
TLFSPAAKMEPMKALDSRFTERSKATPGLTITSTPVGMSPLDKAKDSSTLKESKLKDDTS
SDSEEKMAVKSFSMPKRKAEMEGGEVVEKRRKGRPRKDNKMMMPMSQPFPQTPVVVEKEP
SRAAAPPAVLLALPTPASQKSFTHQVSAEPSVYLEVENEASSVAGVRLSQLRCSRDGREW
NSLLPSRILIAAGSLEVVAVACEDRTLSVFSACGRRLIPSILLPAPVSNLHCSGWFVMVL
TAAATLSVWDVQKQMALVKNESMLTILSGPGISVTQSLLTQQGVPVIGLSTGKSYCFSSS
LGTWNLIADKLDSLVQCADFRNCLTSQDALGSTGPLAIMQGRNISAGRMASRLSSTPHHL
QQGMTLAFLENQLASTLTLGSGPEYHHWLIVYTRFLVNEGYEQRLRELCKDLLGPVHKST
GSSWEPTILGRRKRDLLHEVLPVIGQNLRFQRLFTEYQDQLELLRSK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttgaaaccaagttgggtcagtcacaatggaaaaccaatattttcagtcgat
atccatcctgatggaaccaagtttgctactggtggccaaggggaggactctgggaaggtg
gtcatatggaacatgtcgccagtactacgggaggaggacgagaagagtgaaaacattccc
aagatgctctgccaaatggacaatcatctagcatgtgtgaattgcgtccgatggtccaac
aatggcctgtaccttgcctcaggtggagatgacaaactggttatggtgtggaagcgagca
gcgttcattggtcccagcacagtctttggatctagcagtaagcttgccaatgtggagcag
tggcgatgtgtgaccattctgagaaatcacactggagatgtaatggatgtggcctggtca
cctcatgatgtgatgttggcctcctgcagtgtggataacaccattgtgatctggaacgca
cgtaaatttccagagattataaccgccctgaagggccacactggtctggtgaaggggctg
acgtgggaccctgttgggaagtacatcgcctcccaggcagacgaccgcagcctgaaggtg
tggaggaccatggactggcagctggaaactaatatcactaagcccttcaatgagtgtggt
gggaccactcacgtcctccgtctcagctggtctcccgacggacagtacctagtctccgcc
cacgccatgaacaactccggccccaccgcccagatcatagagagggacggctggaagacc
aacatggactttgttggacacaggaaggccgtaaccgttgtgaaatttaatcccaagatc
tttaagaagaagcacaagaacgggagttctcagaaggggagtgggccctactgctgctgt
gctgtgggaagcaaagaccgctccctctccgtatggttgacctcactgaaacggcccctg
gttgtgatccatgacctgtttgacaaatctatcatggatatatcatggacattgaatgga
atgggaatcatggtgtgctccatggatggcactgtagcattcctgagtttcaacctggat
gagcttggagacccgctaaatgaagaggaaaagaactccattcatcagaacatctatggt
aagagcttggccatcaccagcgtagaggcccagctctccaccaccatcatagagaaccca
gagatgctgaagtaccagcccgacagacaagccgaacgggccagcgcagtcctaggcatt
ggccttgagacccagaccaccaagctcaccaacgtcgtcaacggagagtccctggaagac
atccgcaagaatctgctgaagaagcaggtggagaccaggacagcagatggccggaggagg
attacccccttgtgcattgcgcagcttgacacaggggatttctcgccggcgctgtttaac
agcgtacccatcctgcccggctcctccatgtccaatcagctcaccccgcagctctcctcc
gagtccaacgcctccaactccctgggcctgcgccccctccaggacacctcgccagggaag
ccctccgaggagaacaaagacggtgccaccccatctacaaattccattggcatgaagacc
accctgttctcccctgccgccaagatggagcccatgaaggctctggactccaggttcaca
gagaggtcaaaggccacgccagggctcacaatcacctctacccctgtaggcatgtccccc
ctagacaaagctaaagacagcagcactttgaaggagtccaagttgaaagacgacacgagc
agtgacagcgaggagaagatggccgtgaagtccttctccatgcccaagaggaaggcggag
atggagggaggtgaggtggtggagaagcggaggaaaggccggcccaggaaagacaacaaa
atgatgatgcccatgtcacagccattcccgcagactccagtggtggtggagaaggagccg
tctcgagcagctgctccgcctgcagtgctccttgcacttcccaccccggcgtcgcagaag
tctttcacccaccaggtgagtgcggagccctcggtgtacctggaggtggagaatgaggca
tcatccgtggccggggtgcgtctaagccagctgcgctgctccagggatggccgcgagtgg
aacagcctcctgcccagccgcatactcatcgccgccggcagccttgaggtggtggcagtg
gcgtgtgaggaccgcacgctgtccgtcttctccgcgtgcggccggcggctcatcccgtcc
atcctgctgccggcgcccgtctccaacctgcactgctccggctggttcgtcatggtgctg
acggccgccgccacgctgtctgtctgggatgtgcagaaacagatggcacttgtcaagaac
gaatccatgctcaccatcctctcaggcccaggcatcagtgtcacgcagtctctgctcacc
cagcagggtgtccctgtgattggcctgtctactgggaagtcctactgcttcagctcctcc
ctggggacctggaatctgattgctgacaagctggactcgcttgtgcagtgtgccgacttc
aggaactgcctgacttcccaggatgctctgggctccacgggccctttggccatcatgcag
ggccgcaacataagcgcgggtcgcatggcctctagactgtcatccacgccccatcacctg
cagcagggcatgaccctggccttcctggagaaccagctggcgtcgaccctcacccttggc
tccggaccagagtaccaccactggctcatcgtctacactcgcttcctcgtcaacgagggt
tatgagcagcggttgcgtgagctgtgtaaagacctactgggaccagttcacaaatccacc
ggcagctcctgggagcccactatcctgggccggcggaagagggatctcctgcacgaggtt
ctcccagtcatcggacagaacctgcgcttccagaggctcttcaccgagtaccaggaccag
ctggagctgctccggagcaaatag
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