Clupea harengus (Atlantic herring): 105889948
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Entry
105889948 CDS
T09045
Symbol
rnf34a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34a isoform X2
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889948 (rnf34a)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105889948 (rnf34a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105889948 (rnf34a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
ARMET_C
FYVE_CARP1-2
HeH
Prok-RING_4
zf-C3HC4_2
zf-RING_5
FYVE
CcdA
MPS2
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
105889948
NCBI-ProteinID:
XP_012671340
Ensembl:
ENSCHAG00000010217
UniProt:
A0A6P3VG61
LinkDB
All DBs
Position
7:complement(7535238..7546022)
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AA seq
371 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGAVRGQQTGFGTGAGPFRFAPSAGYSTYPPTSSGSPSL
VCKACGQAFSVFRRKYMCCDCKKSFCSLCSVLQDNLRRCTTCDLLRATAFQRPLLMRLRV
KDLRQYLLLRNIPTDTCREKEDLVDLVLVHQGAESDDGDEEPDTPTLQSRPLYEPPPAAL
EPPVSSPAQISPVNASQGEAISRSNSSGSTNQDIGDATSLSLLNLEPTDHTPEVSPQTRR
RARASLSDLSSLEDVERLTVRQLKEILVRNFVSFSGCCEKWELVERVRRLYRENEENRKS
MENVNSAITADGVQSLLVTDENLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQ
YVVRAVHVFKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcctcatccatgtgggcatcatgctgtggtctgttgaatgaggtgatg
ggcacaggtgcggtccgagggcagcagacggggttcgggaccggtgcgggccccttccgg
tttgctcccagtgctggatactccacatatccccccaccagctcagggagccccagcctg
gtttgcaaggcctgcgggcaggctttctccgtcttcagaaggaagtacatgtgctgcgac
tgcaagaagagcttctgctcgctgtgctccgtgctgcaggacaacctgcggcgctgcacc
acctgcgacctgctcagggcgacagccttccagcggccactgctcatgcggctgcgcgtc
aaggacctgcgccagtacctgctgctgcgcaacatccccaccgacacctgccgcgagaag
gaggacctggtggacctggtgctggtccaccagggcgccgagagtgacgacggtgacgag
gagcccgacacgcccacgctgcagtctcggccactctacgagccgccacccgccgccctg
gagccccccgtctcctctcccgcccagatctcccctgtcaatgcctctcagggagaagcc
atcagcaggagcaatagctcagggtccaccaatcaggacataggtgatgccacctccctg
tctctccttaacctggagcctactgaccacacccccgaggtgagtccgcagacacgccgg
cgtgcacgggcctcactctcggacctgtcttcgctggaggacgtggagcggctgaccgtg
cggcagctcaaggagatcctggtgcgcaacttcgtcagcttctcgggttgctgtgagaag
tgggagttggtggagcgcgtgcggaggctgtaccgcgagaacgaggagaaccgcaagtcc
atggaaaacgtgaacagtgccatcactgccgatggcgtgcagtctctgctggttactgac
gagaacctgtgccggatctgcatggacgcggtgatcgactgcgtgctcctggagtgcggc
cacatggtcacctgcaccaagtgtggcaagcgcatgagcgagtgccccatctgcaggcag
tacgtggtgcgtgccgtgcacgtcttcaagtcctaa
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integrated database retrieval system
