Clupea harengus (Atlantic herring): 105889976
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Entry
105889976 CDS
T09045
Symbol
hexb
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
char00513
Various types of N-glycan biosynthesis
char00520
Amino sugar and nucleotide sugar metabolism
char00531
Glycosaminoglycan degradation
char00600
Sphingolipid metabolism
char00603
Glycosphingolipid biosynthesis - globo and isoglobo series
char00604
Glycosphingolipid biosynthesis - ganglio series
char01100
Metabolic pathways
char04142
Lysosome
Module
char_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105889976 (hexb)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
105889976 (hexb)
00513 Various types of N-glycan biosynthesis
105889976 (hexb)
00531 Glycosaminoglycan degradation
105889976 (hexb)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
105889976 (hexb)
00604 Glycosphingolipid biosynthesis - ganglio series
105889976 (hexb)
00511 Other glycan degradation
105889976 (hexb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105889976 (hexb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105889976 (hexb)
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
105889976 (hexb)
Chaperones and folding catalysts [BR:
char03110
]
Intramolecular chaperones
Others
105889976 (hexb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
105889976
NCBI-ProteinID:
XP_012671372
Ensembl:
ENSCHAG00000011143
UniProt:
A0A6P3VHB9
LinkDB
All DBs
Position
12:11452271..11467044
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AA seq
549 aa
AA seq
DB search
MGFLVKLGILVLVVAVCQAYQDIWDYDGHKLKDTDYLSLWPMPQKVQTSVTAFKLSSSNF
QIVHAKQSSAGPGCSLLQTAFRRYFDYIFGYMKKQGFSKEPKKTVGEEVLELQVLITSSD
SECDGYPGLKSDESYLLSVDQPSAVLQAPTVWGALRGLETFSQLVYEDAYGSRNINKTAI
SDFPRFAHRGVLLDTSRHYLPLKVILANLEAMAMNKFNVFHWHIVDDPSFPYVSRTFPDL
SQKGAYHPYTHVYTPSDVKMVIEFARMRGIRVIPEFDTPGHTQSWGKSQKDLLTPCYSGA
TPSGSYGPVNPMLNSTYDFMASFFKEISSVFPDAYVHLGGDEVDFSCWKSNPDITKFMAE
QGFGKDYSKLESYYIQRLLDIVSTTNKGYMIWQEVFDNGVKLKADTLVHVWIWFNAGGWT
NEMSRVTAAGYQTLLSAPWYLDQISYGQDWQKLYKADPYDFNGTDEQKKLVIGGEACLWG
EYVDATNITPRLWPRASAVSERLWSDASVKDVNKAYVRLVQHRCRMVERGIAAEPLFVGY
CPHEYKGNL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcttgtgaagttggggattctagtgttagtggtcgctgtgtgtcaggcatat
caagacatctgggactacgacggccacaaactaaaagacacggactatctgtctctgtgg
ccaatgccacaaaaagtacagacgtccgtaactgctttcaaactgagcagctccaacttc
cagattgtccatgctaaacaatcgtctgctggacccggctgtagtcttctgcaaacggca
tttcgcaggtatttcgactacatatttggctacatgaagaaacaaggcttcagtaaagag
ccgaaaaagacagttggcgaagaagtgttggagcttcaggttttgatcacatcaagtgat
tctgaatgcgacggctatccgggtttgaagtccgacgagtcatatctgctgagcgtagac
cagccgtcagcagtgctccaagctccaacggtgtggggagccctgagaggccttgagacg
tttagccagctggtgtatgaagatgcgtatggaagtagaaatatcaataagacggccatc
tcggacttcccccggtttgcccatagaggagtgcttttggacacatctcgccactacctg
ccactcaaagtcatcttggccaatctggaagccatggccatgaacaagtttaacgtcttc
cactggcacatcgtagatgacccgtccttcccctacgtgagtcgcaccttccccgacctg
agccagaagggcgcctatcacccgtacacacacgtgtacactccctccgacgtgaagatg
gtgatcgagttcgctcgcatgaggggtatccgggtcattccagagtttgacacaccaggt
cacacgcagtcgtggggcaaaagccagaaggacctgctgaccccctgctactcgggcgcc
actcctagtgggtcgtacgggccggtcaatcccatgcttaactccacctacgacttcatg
gcgtccttcttcaaggagatcagctccgtgttcccggacgcttacgtgcacctcggggga
gacgaggtcgacttctcctgctggaaatccaaccctgatatcacaaagtttatggcggaa
caggggtttggcaaagactacagcaaactggagtcctactacatccagaggctcctggac
attgtgagcaccactaataaagggtacatgatctggcaggaggtgtttgacaacggagtg
aagctgaaagccgacacactggtccacgtgtggatctggtttaatgcgggcgggtggaca
aatgagatgtcccgtgtcaccgccgctggatatcagaccctcctctccgccccttggtac
ctggaccagatctcatacggccaggactggcagaagctctacaaagccgacccctacgat
ttcaatggcactgacgagcaaaagaagcttgtgattggaggagaggcttgtctctgggga
gagtatgtggatgccaccaacatcacgccccgcctctggccgcgtgccagtgccgtgagt
gagcgtctatggagtgacgcgagcgttaaggatgtgaataaagcctacgtccgcctggtg
cagcaccgctgtcggatggtcgagcgcggtattgcagccgaacctctgtttgtgggctac
tgtccgcacgagtacaaaggaaacctttga
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