Clupea harengus (Atlantic herring): 105890005
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Entry
105890005 CDS
T09045
Symbol
rhobtb4
Name
(RefSeq) rho related BTB domain containing 4 isoform X2
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105890005 (rhobtb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890005 (rhobtb4)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
char04031
]
105890005 (rhobtb4)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105890005 (rhobtb4)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
105890005 (rhobtb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
105890005
NCBI-ProteinID:
XP_012671411
Ensembl:
ENSCHAG00000020760
UniProt:
A0A6P8FCV6
LinkDB
All DBs
Position
7:10530906..10563229
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AA seq
735 aa
AA seq
DB search
MDIDTDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYR
VCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSLANPNSLRHVRT
MWYPEIKHFCPRTPIILVGCQLDLRYADLDAVNRARRPLAKPIKPTDILPPERGHEVAKE
LGVPYFETSIVAQFGVKDVFDNAIRAALISRRHLQFWKSHLKKVQRPLLQSPFLPPRPPR
PIVGIPDPPPVDGEGPDTLFSRPLCADVLFLLQGGSIRVFAHKVYLATSCSKFYDLFTMS
LGGGTAAGGGAGGDGVEHEGGEEQMEGGGGGAGGGEEEEQSRRGAKEQAGRTKSLDIDKE
GDGGTRRSRRPLLLEQGSLRTSQSDNALPAWGQGAALGAMGTGRALMGWGRGFLGVCLEH
VDDPKTGWPRIMTVVSMDSLIQEEPFQAVLQYLYTGNLDEGRGDLMQVATIAELLEVFDL
RMMVANVLNHESFMNQEITKAFHVRRANRIKECLNKGTFADVVFRLDDGFLPAHKPLLIS
SCDWMAAMFRGSFMESYVEEVAIPNTDVACMRAVLEYLYCGLLTPSPDLEPLELIVLANR
LCLPRLVALTEQHAVDDLLHVAVKGVDIDGQVLAYLERAQFHNAKQLSVWCLHHICTNYN
SVCRKFPKDMKNMSPENQKHFEKQRWPPVWFLKEEDRYKRSQKEREREEELLRKQNTKRG
WCFWKHPAPSTSHIS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatattgacacagactatgagcggcccaatgttgagacgatcaaatgcgtggtggtg
ggcgacaacgctgtggggaagacgcgtctgatctgcgcccgtgcctgcaatgccaccctc
acgcagtaccagctgcttgccacccacgtgccaaccgtctgggccatcgaccagtaccgc
gtgtgccaggaggtgctggagaggtccagagatgtggtggatgaggtcagtgtatccctc
agactgtgggacacctttggagatcaccacaaagacagacgctttgcctatggcaggtcg
gatgtagtggtgctctgtttctcgctggccaaccccaactctctgcggcacgttcgcacc
atgtggtacccggagatcaagcacttctgcccccgcacccccatcatcctggtgggctgc
cagctggacctgcgctacgccgacctggatgccgtcaaccgcgctcggcgccccctagca
aaacccatcaagcccacagacatccttcctccggagcgcggccacgaggtggctaaggag
ctgggcgttccctacttcgagaccagcatcgtggcccagttcggcgtgaaggacgtcttt
gacaatgccatccgtgccgcgctcatctcgcgccgccacctgcagttctggaagtcacac
ctgaagaaagtgcagcggcccctcctgcagtcgcctttcctgcccccgcggcccccccgg
cccattgtgggcatccccgatcccccgccggtggacggcgaggggcccgacacactcttt
tctcgtcccctctgcgccgatgtgcttttcctcctgcagggcggcagcatacgcgtcttc
gcccacaaggtctacctggccacctcctgctccaagttttacgacctcttcaccatgagc
ctgggtggtggaacagcggcaggaggaggagcaggaggggacggggtggagcatgaggga
ggagaggagcagatggagggaggaggaggaggagcaggaggaggagaggaagaagagcag
agcagacgaggagccaaagagcaggccgggcgcaccaagagcctggacattgacaaggag
ggtgacgggggcacgcggcggtccaggcgtcctctcctgctcgagcagggctctctcagg
acttcccagagtgataacgcgctccctgcctggggacagggcgccgccttgggggccatg
ggcaccggacgagccctgatgggctgggggaggggcttcctgggggtgtgtctggagcac
gttgacgacccaaagacgggatggccacgaatcatgactgtggtctctatggacagcctc
attcaggaggaaccctttcaggcggtgctacagtatttatacacaggcaatctggacgag
ggccgtggggacctgatgcaggtggccaccatcgctgagctgctggaggtgtttgacctg
cgcatgatggtggccaatgtgctcaaccacgagagcttcatgaaccaggagatcaccaag
gccttccacgtgcgacgggctaaccgcatcaaagagtgcctaaacaagggcactttcgct
gatgtggtgtttcggttggacgacggcttcctgccggcccataagcccctgctcatctcg
agctgcgactggatggcggccatgttccgcggctccttcatggagagctacgtagaggag
gtggcgattcctaacactgatgtggcgtgtatgcgggcggtgctggagtatctgtactgc
gggctgctgactcccagccccgaccttgagcctctggagctgatcgtcctggccaaccgc
ctgtgtctcccgcgcctggtggctctcacagagcagcatgccgtagatgacctgctgcac
gtggctgtgaagggggttgacattgacggacaggtgctcgcttacctggagagggctcag
ttccacaacgcgaagcagctatcagtatggtgcctgcatcacatctgcaccaactacaac
agcgtgtgtcgcaagttccccaaagacatgaagaacatgtcgccagagaaccagaagcac
tttgagaagcagcgctggccgcccgtctggttcctgaaggaggaggaccgctacaagcgc
tcgcagaaggagcgtgagcgcgaggaggagctcctgcgcaaacagaacaccaagagaggc
tggtgcttctggaagcatccggcgccctccacctctcacatctcctga
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