KEGG   Clupea harengus (Atlantic herring): 105890015
Entry
105890015         CDS       T09045                                 
Symbol
tet3
Name
(RefSeq) methylcytosine dioxygenase TET3 isoform X3
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105890015 (tet3)
   03036 Chromosome and associated proteins [BR:char03036]
    105890015 (tet3)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     105890015 (tet3)
Transcription factors [BR:char03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    105890015 (tet3)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105890015 (tet3)
SSDB
Motif
Pfam: Tet_JBP
Other DBs
NCBI-GeneID: 105890015
NCBI-ProteinID: XP_012671431
Ensembl: ENSCHAG00000027625
UniProt: A0A6P3VH95
LinkDB
Position
7:9235502..9282557
AA seq 1944 aa
MEIGSHDRLVEGVLSQEPTNGVSRHLPCEEGDVSGGGKPGGELPQTWGAGVTSHDKASYP
QPQSLTLTQPQAQQQQQQQQQQGCWSGGALSTVDMEDARNLVALSASAGPLPPSAHPEPQ
PCTALLYEKFNQEMAGRVDKARPPGWGAESERCPPEDINTLQTALSQARHGRKPPNCDCD
GPDCPDYLEWLEKKIASNSQGKTHFKMSEALHLHPQPHQPSQHPHQPNGASSNCEQGPPP
QAHSEKPPVPIPFSPAPIPCSPSVLSIAKEKNISLETAIALEALTQLSATIPQTVIPPAE
ASATNHPQHYTPHHLSSHPQHGNRLVLSSPAHMSSSSSSPMPQQSVPPGVDPQQDSHPWE
QHRPRSQGEAPAPRMMPHHPSPYSPSVSPFPGPHPQDGTRSPLPQQWQQGPLGSCGKSSP
MTPWMGMNVDSQPRYPHPPQGSGDPMSELKQLLGDASGKYTNAGFRFPPPQLLPNEKGGP
HVRTPNIKQEVDNGEYLSSAMGRYGMMNGQQFQQLQQQYPPSPLSPNPLSIRHSTQAALQ
QHLHHKRNLFSNPLSPSQRAPMMCQNLRKWWPQMGPDMPMMPIKQEPKEPKKKTPQSSPH
LKLGPPLPKPKPIVIKKVKQKASQPTFLPQNQIVLQKAMAKAQAQAAQFLPGKEAGSLPS
LPFYNPSQAVVATVPSAQSQESILNICSVPSSASSVPGNTPPVSVPLPVALPAPQEDSAT
SGSSGGPASGALTSSTSTPQTSAAQPTPLLTGLSSLDPKFEDLIRQFEEEFGETTSSASA
AASDAPSATTPNGPHAQIQPEGSGQPEAMEPQQDANSGQAKPTSPPAEQPNIFPGALSDG
QLAMEVGKQTEASVASEGAPPASTQPSAVSQISQQGELPLSTDPPVSISHEALLEQQQCQ
RLQDPFATPGSPASKRMKIESSGGVTVLSTTTSCYTPNWEDDTPTKDGLPMTPSLNGFLE
SPLRYLDTPTKNLLDTPAKDSQAEFPLCDCVEQILEKDEGPYYNHLGSGPTVASIRELME
ARYGEKGEAIRIEKVVYTGREGKSSQGCPIAKWVIRRSGEKEKLMCLVRHRAGHHCANAV
IIILIMAWDGVPRSLADKLYQELTETITKFGNPTSRRCGLNDDRTCACQGKDPDTCGASF
SFGCSWSMYFNGCKYARSKIPRKFRLQGDRPDEEGNLGENFQDLATEMAPLYKQLAPKAY
SNQCLHESEGSDCRLGLKEGRPFSGVTACMDFCAHAHKDQHNLHNGCTVVCTLTKEDNRT
VGELPDDEQLHVLPLYKVSNADEFGSVENQRLKMQTGAIQVLNNFRREVRKLPEPAKSCR
QRRLDAKKAAMEKKKGQKMPSETPEKTIKTKTIHSGSPHLQQGNKAIPKQEMKPIIKKEP
VDRYHSFNGALPPGYPAPGNGQTAETYGGMNNAYSFPGYYARGGLPSNSQTPAAAPINGF
HPNLPALPYGYCNYPPKALFPPELMGYEGRGGSWPKGVAAAATSIDQKPDIQSLQARLGH
AYPDQQTEDPAARGYVTSSNTPQPHGRASHTPTSPAESRRATPIIKQEPMDVAVYGNSRQ
DAGSQSCPGTPSTTPQPSESWPSQKPNGLMPKSWEGPHRPGSANSPFTPDKQMLHQNPTH
HPQYPYPQQQQQQQWNHFHGRNTPMASPAPSPSPSLTQGFSPAPSPHPSTPRHWESPSPS
GQPKAWPAGSAGFPAVKLENPAGGFPDKMLSRVGESRGSTPLGLQEKAWRTSGGSVAGST
PSPTPEGRQFPDMLQRPDAQGSWMPCKAESETESQGERELDDDGVWSDSEHNFLDPNIGG
VAVAPAHGSVLIECARRELHATTPLMRPNRSHPSRISLVFYQHKNLNQPAHGLALWEAKM
KLLAERALQRQQEAVLLGLPPEDIKAFGKKRKWASGAASPSPGPAKDKREGVATRLAPTL
NTSSLITVSSYAYTQLTGPYSRLV
NT seq 5835 nt   +upstreamnt  +downstreamnt
atggaaatcgggtcccatgaccgcctggtggaaggcgtgttgagccaggaaccgaccaat
ggtgtgagcaggcacctcccctgcgaggagggagatgtgagcggaggagggaagcccgga
ggtgagctgcctcagacctggggagctggagtcacaagccatgataaagcatcctacccc
cagccccagtcgctgaccctgacacagccgcaggctcaacagcagcagcagcagcagcag
cagcagggctgttggagtggaggagcacttagcaccgtggacatggaggatgccaggaac
ctggtggccctctccgccagcgctggacccctaccaccatctgcccaccccgagccccag
ccctgcactgcactgctgtacgagaagttcaaccaggagatggccggcagagtggacaag
gccaggcctcccggttggggagccgagagtgagcgctgccctcccgaagacataaacact
ctccagacagccctgagccaggccaggcacggccgtaagcccccgaactgtgactgcgat
gggcccgactgccccgactacctggagtggctagagaagaagatagcatccaacagccag
gggaagacgcatttcaaaatgtctgaagcactccacttgcaccctcagccccaccagcct
tcccagcatcctcaccaacccaacggtgcaagctccaactgtgagcagggtcctcctcca
caggcccacagtgaaaagcctccagtcccaattccgttctcccctgctcctatcccatgt
tcccccagtgtgctgtccattgctaaagagaagaacatcagcctggagacggccattgcc
ctggaggctctcacccagctgtctgccaccatcccgcaaacagtgatccctcctgcagaa
gcatccgccacaaatcacccccagcattacacaccccaccacctgtcctcgcatccacaa
catgggaacaggctagtgctatcatctccagcacacatgtcttcttcctcctcctctccg
atgccacagcagtctgtccctcctggagtggacccacagcaggactcccatccctgggag
cagcacaggccccgttctcagggggaggcccctgcaccccgcatgatgcctcaccatccc
tccccgtactcgccctcagtctcgcccttccctggtccacatccccaggacggcaccaga
agccctctaccccagcagtggcagcagggtcctctgggaagttgcgggaagagttccccc
atgaccccttggatggggatgaacgtcgactcccagcctcgataccctcatccaccccaa
ggcagcggtgaccccatgtccgagctgaagcagctgctgggagatgccagtgggaagtac
acaaatgctggcttcaggttccctcccccccagctcctgcccaacgaaaaaggtggccca
catgtgagaacacccaatatcaagcaggaagtggacaatggcgagtatctgagctcggcc
atggggcggtatggaatgatgaacggccagcagttccagcagctccagcagcagtacccc
ccgtcccctctttcccccaaccccctgtccatcaggcactcaactcaggcagcacttcaa
cagcaccttcaccacaagcgaaacctcttctccaaccccctgtctcccagccagagggcc
cccatgatgtgccagaatctgcgcaagtggtggccccagatggggcccgacatgcccatg
atgcccatcaagcaggagccaaaagagcctaagaagaagaccccccagagctccccgcac
ctcaagttgggtccccctttgcccaaacccaaaccgattgtcattaagaaagtaaagcag
aaagcttcacagcccaccttcctgccacagaaccagatagtcttacaaaaggctatggca
aaggcccaagcccaggccgctcagtttctgcctggcaaggaggcaggttctctcccgtct
ctgcccttctataacccctctcaggctgttgtggctaccgtgccctcagctcaatctcag
gaatccattttgaacatttgtagtgttccctcctcggcttccagtgtccctggaaacacc
ccacccgtgtccgtcccgcttcctgtcgccctgcctgcaccacaagaagattcggcgact
tcaggctcctccggtgggcccgcatcaggtgcgctcacctccagcacctctacacctcag
acctctgcagctcagcccacacctctcctcacaggtctcagttcgctcgaccccaagttt
gaggatctgatccgccagtttgaggaagagttcggggagaccacctcatccgcttccgct
gctgcctcagacgccccatcagccaccacccccaatggtcctcacgcccagatccaaccg
gaaggttctggtcagccagaggcaatggaaccccaacaagatgctaactcagggcaagct
aaacccacgtcaccacctgcagagcagcccaacatcttcccgggggccctttcagatggc
caactggccatggaggtgggaaagcagacagaagctagtgttgcaagtgaaggagctcct
ccagcttccacccagccctctgctgtgagccagataagtcagcagggtgagctccccttg
tccacagatcctccggtgtccatttcccatgaagctcttctggagcagcagcagtgccaa
aggctccaggatcccttcgccacacctggctccccagcatccaaacgcatgaagatcgag
tcatccggaggcgtgacggtgctctccacaaccaccagttgttacacccccaattgggag
gacgacacccccacgaaggatggcctccccatgacaccctcactaaacggcttcctggag
tcaccgctgcgctaccttgacacccctacaaaaaatctgctggacacccctgccaaggat
tcccaggctgagtttcccctttgtgactgcgtggaacagatcctggagaaggacgagggg
ccgtactacaaccacctggggtctggacccaccgtggcctcaatcagagaacttatggag
gccaggtatggagaaaagggagaggccatccgcattgagaaagtggtttacactgggagg
gaagggaagagttctcagggatgcccaattgcaaaatgggtgatccggcgcagcggagag
aaagagaagctgatgtgtctggtgcgccaccgggcagggcaccactgtgccaacgccgtc
atcatcattctcatcatggcatgggatggtgtgccacgttcccttgccgacaagctctac
caagagctcactgagacaataaccaagtttggcaaccccaccagccgacgctgtggactc
aatgatgatcgcacctgtgcttgccaggggaaggaccctgatacctgcggtgcctccttc
tcctttgggtgctcctggagcatgtattttaatgggtgcaagtatgcccgcagcaagatt
ccccgcaagttcagactgcagggagaccgtcccgatgaggaagggaatctcggtgagaac
ttccaggatctggccacagaaatggctcccctgtacaagcagctggcccccaaggcgtac
agcaaccagtgtctgcatgagagtgagggttcagattgtcgactcggattgaaggaaggg
aggcccttctctggagtcacggcctgcatggacttctgtgcccacgcccacaaagaccag
cacaacctgcacaacggttgcactgtggtatgcactctgacgaaagaggacaatcggacg
gtgggtgagcttccagatgacgaacagctgcacgtgcttccgctctacaaggtttccaat
gccgacgagtttggcagcgtggagaaccagcgccttaagatgcagaccggggccatccag
gtgctaaacaactttcgacgtgaggtccggaagctccctgagccggccaagtcttgccgc
cagcgccggctggatgccaaaaaggctgcgatggagaagaagaaggggcagaagatgccc
tcagagacaccagagaagaccatcaaaactaagacgatccatagtggatccccacacctt
cagcaaggcaataaagcaatcccaaaacaagaaatgaagcccatcatcaaaaaagagcct
gtagatcgataccattcctttaatggtgccctgccaccgggctacccagcaccagggaac
ggccagacagctgagacctacgggggcatgaacaacgcctactccttccctggatactat
gcaagaggaggcctcccttccaacagccagactcctgcagcggcgcccatcaacggcttt
cacccgaatcttcctgcactgccctacggttattgcaactacccccctaaagcactattc
cctccggagctcatgggctatgagggccggggtggatcatggcctaaaggagtggcagca
gcagccacatccatcgaccagaagccagacattcaaagcctgcaagccaggctgggacat
gcctaccccgatcagcaaacagaagacccagctgcccgtgggtacgttacttcctccaac
accccacagccccatggccgcgcaagccacactcccacttccccagcagagtctcgcaga
gccacaccaatcattaagcaggagcccatggatgtcgcggtttatggcaacagcaggcag
gacgcaggctcccagagctgtccaggcactcccagcaccaccccgcagccttccgagagt
tggcccagccaaaagcccaatggcctgatgcccaaaagctgggagggtccacacagacca
ggttctgcaaactctcccttcaccccagacaagcagatgctccaccagaatcccacccat
caccctcaatacccttacccccagcagcaacaacaacagcagtggaaccatttccatggc
cgtaatacccctatggcctctccagctccttctccatcaccgtcactcacgcagggcttc
tctccagcaccatctcctcatccctccaccccacgccactgggaaagtccatcaccaagt
ggtcagcccaaagcttggcctgcaggatctgccggcttcccagctgtaaaacttgagaac
cccgccggaggtttcccagataagatgctttctcgggtaggcgagagtcggggctccact
ccacttgggctccaggagaaagcctggaggactagcggcggttccgttgccggcagcacc
ccatccccaaccccagagggacgccagttccctgacatgctgcagcggccagatgctcaa
ggcagctggatgccctgtaaggcagagagcgagacggagagccagggagagcgcgagctg
gatgacgatggggtgtggtcggacagcgagcacaacttcctggacccaaacatcggtggt
gtggcagtggctcctgcccacggctcggtgctgatcgaatgtgcccggcgcgagctgcac
gccaccaccccgctcatgcggcccaaccgctcccacccgtcgcgcatctccctcgtcttc
taccagcacaagaacctcaaccagcccgcccacggcctggcgctgtgggaggccaagatg
aagctgttggctgagagggcacttcagcggcagcaggaggctgtcttgctcggcctgccc
ccggaggacattaaggctttcggcaagaagcgcaagtgggcctcgggagcagccagtccc
agccccgggccagccaaggacaagagggagggggtcgcaacgcgactcgctcccacactg
aacacctcctcgctgatcaccgtgtcatcctacgcctacacacagctcacggggccatac
agccgactggtctga

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