Clupea harengus (Atlantic herring): 105890044
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Entry
105890044 CDS
T09045
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105890044 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105890044 (ppil2)
03110 Chaperones and folding catalysts [BR:
char03110
]
105890044 (ppil2)
04121 Ubiquitin system [BR:
char04121
]
105890044 (ppil2)
Enzymes [BR:
char01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
105890044 (ppil2)
Spliceosome [BR:
char03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105890044 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
105890044 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
105890044 (ppil2)
Chaperones and folding catalysts [BR:
char03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
105890044 (ppil2)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
U-box type E3
105890044 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
eIF3_N
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
105890044
NCBI-ProteinID:
XP_031426157
Ensembl:
ENSCHAG00000026220
UniProt:
A0A6P8FSS1
LinkDB
All DBs
Position
7:complement(6043998..6079320)
Genome browser
AA seq
554 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTNFYGGRRNVIPKANFRRLPFDHCSLCLQPFEYPMCTTEGVV
FDLMSIVPWIKKFGTNPATGEKLEAKSLIKLNFAKNQEGKYHCPVLYTIFNNNSHIVTNK
VTGNVYSNEAVEQLNIKTKSFRDLLTDEPFTRQDLITLQDPTNLDKFNVSDFFHVKNNLK
VLDPEEEKAKLLPDYHLKTTNMETRETLAELYRDYKGDELLASTMKVPVPKKTDKLNAAH
YSTGTVSASFTSTAMTPATVHVADAIADDSVRFQYVKKKGYVRLRTNKGDVNLELHCDKV
PKAGENFIKLCKKGYYDNTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFRDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDRKHTVFGRVVGGFEALTALENVEADPKTD
LPKSELKVLSTTVFVDPYEEADAQIAAEREKDVQEQEQERAQATATQSRAKEEAQPKTFR
PGVGKYINMAATKRPADNDKPSTSEAVFKKPKGGTGFDSDKPSTSKPSTSKPSTSEAVFK
KPKGRTGFGDFSSW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagacagcatcaaaaagataaaatgtatatcacctgttcggagtacacgaac
ttctatggagggagaagaaacgtaataccgaaggccaacttcagacggctcccctttgac
cactgcagtttgtgtctccagccatttgaatatcccatgtgcacaacagaaggcgttgtt
tttgacctaatgagcatagtgccatggataaagaagtttggtacaaaccctgccactgga
gagaaactcgaggcaaagtcgctcatcaagctcaacttcgccaagaaccaagaaggcaaa
tatcactgccctgttctctacaccatcttcaacaacaactctcacatcgttaccaataag
gtcacaggcaatgtgtactctaatgaggctgtggaacagctcaacataaagaccaaaagc
tttagagatctgctgactgacgagccctttacacgccaggatctcatcaccctacaggat
cccaccaatctggataagtttaacgtgtccgactttttccacgtgaagaacaatctgaag
gtcctcgacccagaggaggagaaggccaagctgctgccggactaccacctgaagaccacc
aacatggagacacgtgagacgctggctgagctgtacagagactacaagggggacgagctg
ctggcctccaccatgaaggtgcccgtgcccaagaagactgacaagctcaacgcagcccac
tactccaccggcacggtgtcggcctccttcacctccactgctatgactcctgccaccgtc
catgtagcagatgccatcgctgacgattcggtgcgcttccagtacgtgaaaaagaagggc
tacgtgcgcctgcgcaccaacaagggggacgtcaacctggagctgcactgcgataaggtg
cccaaagctggagagaacttcatcaagttgtgcaagaagggatattacgataacacgatc
tttcatcgctccattcggaacttcatgatccaagggggagaccccactggcactggcaca
ggaggcgaatcgttttgggggaagccgttcagagatgagttccggcccaacctctcccac
acgggccgtggcgtcctcagcatggccaactccggaccaaacaccaacaagtcccagttc
ttcatcacgttccgttcctgcgcctacctggacaggaagcacactgtgttcggcagagtg
gtggggggtttcgaggctctcactgccctggagaacgtggaggctgatccaaagacggac
ctacccaagagtgaacttaaagtgctgagcacaaccgtgttcgtggacccttacgaggaa
gcagacgcacagattgcagcggagcgagagaaggacgtgcaggagcaggagcaggagcga
gctcaggccacggccactcagagccgagccaaagaggaggcgcagcccaagaccttcagg
cccggcgtgggcaagtacatcaacatggccgccacgaaacgccccgcggacaacgacaag
ccctccaccagcgaggcggtgttcaagaagcccaaaggcgggacggggttcgacagcgac
aagccctccaccagcaagccctccaccagcaagccctccaccagcgaggcggtgttcaag
aagcccaaaggcaggacggggttcggagacttcagctcctggtga
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