KEGG   Clupea harengus (Atlantic herring): 105890123
Entry
105890123         CDS       T09045                                 
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105890123 (rnf6)
Enzymes [BR:char01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105890123 (rnf6)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105890123 (rnf6)
SSDB
Motif
Pfam: RNF6_N zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 Prok-RING_4
Other DBs
NCBI-GeneID: 105890123
NCBI-ProteinID: XP_031439960
Ensembl: ENSCHAG00000015549
UniProt: A0A6P8GYW4
LinkDB
Position
17:complement(3558132..3567533)
AA seq 773 aa
MVMDPPGGRDERRSSQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQ
RLDGAKERVSSQPRPEPRPQGNEGGEEQGSSGAPEAGSETSNGDSLLEWLNTFRRTGNAT
RSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPDAGEHSEELPVPPPPPPPPPPPPL
APSSIHTATYSVPRPTPYTTQRPSAPFSHAHTPPARPTLGRRSQARRTRNSAAPPLLPPP
PLPVPLTPLRRSVAPQPTSPQPMPVPSAAPTSQPGPDGSGGGAGQPQPTSSSPTAVEEQQ
QQQQQQRQEEAPETVPDPSCAPAQGALVGREPRSSRTRSRGRVRRALAGTGTGGGSGTGD
GLSSRWSRRSRSPLHRSPAPTPATAVPGGVGGSAAIDPAELGSTTATVAMETGEAASAEP
TVPLAEGSVAETNEEESHGVSGVGGPSGGVGGGGVRRHPTIMLDLQVRRIRPGENRDRDS
IASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPS
STALRSILRQIMTGFGELSSLMETEADSENRSGVAAAAGGQDGGVAAGNEGLGAGSQSNG
GSGSGTSESDRGGQGGVEGEVVSGGGGGGGGGGGGLGRVGGGTGVASVGTGGGGGGESRP
ASRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDNLGTRTYGQASLEAEAG
RACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILSSHHD
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggtgatggaccctccgggcgggcgagatgaacgtcgctcatctcaggcagagcgtcta
cgacgggaggaggcctactatcacttcattaacgagctcagtgaggaggaataccggctc
atgagggacagcaacctgctcggaacccctggtgaggtcaccgcagaggagctgaggcag
agattggacggagcaaaagagagggtgtcgtcccagcctcgcccggaaccacgcccacag
ggcaacgaaggtggagaagaacaaggaagcagcggagctccggaggcgggctcagagacg
tccaatggcgactcgctgctggagtggctgaacacattccggcgcacgggcaacgccaca
cgcagtggccagagcggcaaccagacgtggcgtgccgtgagccgcaccaaccccaacagc
ggcgagttccgcttcagccttgagatcaacatcaaccacgagcagcctgacgcaggagaa
cacagcgaagagctccctgttcccccaccacctccaccgccccctcctccgccaccactg
gccccttcctccatacacacggctacctacagcgtccccagacctacgccctacaccacc
cagcggccctctgcgcccttctcccacgcccacaccccccccgccaggcctacgctcgga
cggaggtcccaggccagacgcacgcgtaacagcgccgcacctccgctcctccctcccccg
cccttgcctgtccccctcacaccactgagacgcagcgtggccccccagcctacgagccct
cagcctatgcctgtaccctccgcagctccgacctcgcaaccaggacctgacggcagcggt
ggtggggcgggccagcctcagcccacctcgtcaagccccacggctgtggaggagcagcag
cagcagcagcagcagcagcggcaggaggaggcccctgagactgtcccagacccctcctgt
gcaccagctcagggggcgctagtggggcgcgagccgcgcagcagcaggactcgatcgcgc
ggccgcgtgcgtagggctctggctgggaccgggaccgggggagggagcgggaccggggat
gggctttcgtcacgctggtcacgccgaagtcgctcccccttgcacagaagtcctgccccc
accccagccaccgctgtccctggtggcgttggtggcagcgctgccattgacccagctgag
ctcgggagcacaactgccaccgttgccatggaaacgggcgaagcggcttctgccgagcca
acagtgcccctcgcggagggctcagtggccgagactaacgaggaggagtcccacggtgtt
tcgggtgtgggcggaccctcgggtggcgtaggaggcgggggcgtgcgacgccaccccacc
atcatgctggacctgcaggtgcgtcgaatccggcccggagagaaccgagaccgtgacagc
atcgccagccgcacgcgctcgcgggcccgcgctgccgagaacaccgtcaccttcgagagc
gacagcgggggcttccgccgcaccatctcgcgctcggagcgtgccggcatccgcacttac
gtcagcaccatccgcatcccgctgcgccgcatcagcgagacgggcctgggcgagcccagc
tccaccgcgctccgctccatcctgcgccagatcatgactggcttcggcgagctcagctcc
ctgatggagaccgaggccgactctgagaaccggagtggagtggcagccgccgccggagga
caggatggaggtgtcgccgcaggaaacgagggcttgggcgccggaagccagagcaacggg
ggctcgggttctggaacgtccgagtctgacaggggcgggcaggggggcgtggagggggag
gttgtgtctggaggaggaggtggcggaggagggggaggtggggggctgggtagagtcggg
ggtggtaccggggtagcctctgtgggcacgggcggtggtggtgggggcgagagccgccca
gccagcagggacaccaacaacctagtggagaacggcacgctgcctattctgcggctggct
cacttcttcctcctcaacgacgaggaggacgaggagcacccgcgcggcctcaccaaagag
cagatcgacaacctgggcacgcgtacctacggccaggccagcctggaggccgaggccgga
cgcgcctgcagcgtctgcatcaacgagtacgcccagggcaacaagctgcgccgcctgccc
tgtgcccacgagttccacatccactgcatcgaccgctggctctctgagaacaatacctgc
cccatctgcaggcagcccattctctccagccatcacgactga

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