Clupea harengus (Atlantic herring): 105890123
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Entry
105890123 CDS
T09045
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890123 (rnf6)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105890123 (rnf6)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105890123 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
105890123
NCBI-ProteinID:
XP_031439960
Ensembl:
ENSCHAG00000015549
UniProt:
A0A6P8GYW4
LinkDB
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Position
17:complement(3558132..3567533)
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AA seq
773 aa
AA seq
DB search
MVMDPPGGRDERRSSQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQ
RLDGAKERVSSQPRPEPRPQGNEGGEEQGSSGAPEAGSETSNGDSLLEWLNTFRRTGNAT
RSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEQPDAGEHSEELPVPPPPPPPPPPPPL
APSSIHTATYSVPRPTPYTTQRPSAPFSHAHTPPARPTLGRRSQARRTRNSAAPPLLPPP
PLPVPLTPLRRSVAPQPTSPQPMPVPSAAPTSQPGPDGSGGGAGQPQPTSSSPTAVEEQQ
QQQQQQRQEEAPETVPDPSCAPAQGALVGREPRSSRTRSRGRVRRALAGTGTGGGSGTGD
GLSSRWSRRSRSPLHRSPAPTPATAVPGGVGGSAAIDPAELGSTTATVAMETGEAASAEP
TVPLAEGSVAETNEEESHGVSGVGGPSGGVGGGGVRRHPTIMLDLQVRRIRPGENRDRDS
IASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPS
STALRSILRQIMTGFGELSSLMETEADSENRSGVAAAAGGQDGGVAAGNEGLGAGSQSNG
GSGSGTSESDRGGQGGVEGEVVSGGGGGGGGGGGGLGRVGGGTGVASVGTGGGGGGESRP
ASRDTNNLVENGTLPILRLAHFFLLNDEEDEEHPRGLTKEQIDNLGTRTYGQASLEAEAG
RACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICRQPILSSHHD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggaccctccgggcgggcgagatgaacgtcgctcatctcaggcagagcgtcta
cgacgggaggaggcctactatcacttcattaacgagctcagtgaggaggaataccggctc
atgagggacagcaacctgctcggaacccctggtgaggtcaccgcagaggagctgaggcag
agattggacggagcaaaagagagggtgtcgtcccagcctcgcccggaaccacgcccacag
ggcaacgaaggtggagaagaacaaggaagcagcggagctccggaggcgggctcagagacg
tccaatggcgactcgctgctggagtggctgaacacattccggcgcacgggcaacgccaca
cgcagtggccagagcggcaaccagacgtggcgtgccgtgagccgcaccaaccccaacagc
ggcgagttccgcttcagccttgagatcaacatcaaccacgagcagcctgacgcaggagaa
cacagcgaagagctccctgttcccccaccacctccaccgccccctcctccgccaccactg
gccccttcctccatacacacggctacctacagcgtccccagacctacgccctacaccacc
cagcggccctctgcgcccttctcccacgcccacaccccccccgccaggcctacgctcgga
cggaggtcccaggccagacgcacgcgtaacagcgccgcacctccgctcctccctcccccg
cccttgcctgtccccctcacaccactgagacgcagcgtggccccccagcctacgagccct
cagcctatgcctgtaccctccgcagctccgacctcgcaaccaggacctgacggcagcggt
ggtggggcgggccagcctcagcccacctcgtcaagccccacggctgtggaggagcagcag
cagcagcagcagcagcagcggcaggaggaggcccctgagactgtcccagacccctcctgt
gcaccagctcagggggcgctagtggggcgcgagccgcgcagcagcaggactcgatcgcgc
ggccgcgtgcgtagggctctggctgggaccgggaccgggggagggagcgggaccggggat
gggctttcgtcacgctggtcacgccgaagtcgctcccccttgcacagaagtcctgccccc
accccagccaccgctgtccctggtggcgttggtggcagcgctgccattgacccagctgag
ctcgggagcacaactgccaccgttgccatggaaacgggcgaagcggcttctgccgagcca
acagtgcccctcgcggagggctcagtggccgagactaacgaggaggagtcccacggtgtt
tcgggtgtgggcggaccctcgggtggcgtaggaggcgggggcgtgcgacgccaccccacc
atcatgctggacctgcaggtgcgtcgaatccggcccggagagaaccgagaccgtgacagc
atcgccagccgcacgcgctcgcgggcccgcgctgccgagaacaccgtcaccttcgagagc
gacagcgggggcttccgccgcaccatctcgcgctcggagcgtgccggcatccgcacttac
gtcagcaccatccgcatcccgctgcgccgcatcagcgagacgggcctgggcgagcccagc
tccaccgcgctccgctccatcctgcgccagatcatgactggcttcggcgagctcagctcc
ctgatggagaccgaggccgactctgagaaccggagtggagtggcagccgccgccggagga
caggatggaggtgtcgccgcaggaaacgagggcttgggcgccggaagccagagcaacggg
ggctcgggttctggaacgtccgagtctgacaggggcgggcaggggggcgtggagggggag
gttgtgtctggaggaggaggtggcggaggagggggaggtggggggctgggtagagtcggg
ggtggtaccggggtagcctctgtgggcacgggcggtggtggtgggggcgagagccgccca
gccagcagggacaccaacaacctagtggagaacggcacgctgcctattctgcggctggct
cacttcttcctcctcaacgacgaggaggacgaggagcacccgcgcggcctcaccaaagag
cagatcgacaacctgggcacgcgtacctacggccaggccagcctggaggccgaggccgga
cgcgcctgcagcgtctgcatcaacgagtacgcccagggcaacaagctgcgccgcctgccc
tgtgcccacgagttccacatccactgcatcgaccgctggctctctgagaacaatacctgc
cccatctgcaggcagcccattctctccagccatcacgactga
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