Clupea harengus (Atlantic herring): 105890148
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Entry
105890148 CDS
T09045
Symbol
lmnb1
Name
(RefSeq) lamin-B1 isoform X1
KO
K07611
lamin B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04210
Apoptosis
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105890148 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105890148 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105890148 (lmnb1)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
105890148 (lmnb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
CENP-F_leu_zip
DUF1416
Motif
Other DBs
NCBI-GeneID:
105890148
NCBI-ProteinID:
XP_012671577
Ensembl:
ENSCHAG00000022045
UniProt:
A0A6P3VGH6
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Position
12:complement(12894392..12910017)
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AA seq
594 aa
AA seq
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MATATSTPAGQRISSRIAGSTPLSPTRISRLQEKEELCNLNDRLAIYIDKVRSLESENSV
LHLQITEKEDVRNRELTGLKSLYETELADARRSLDDTARDRARLQIELGKIKSEHEQLLQ
TQAKKDADLSGTQARLKDAEALLNSKEAALATSLTERRTLEAAMADLQAQVQELDTGLIA
ARKQLGEETLLRVDLENRCQSLMEDLEFRKNMFEEEVKDTRRRHETRLVEVDSGRQMDYE
FKLQQGLTDMRQQQEEQVKLYKDEMETTYVAKLENVRMSSEMNSSAASMAREELKESALR
VESLAAQLSSMQKETRGWQERISELENALSQERDMSRRILADKEREISDIRAKMQQQLDD
YEQLLDVKLALDMEINAYRKLLEGEEERLNLSPSPSSRVTVSRASSSRSVRTTRGKRKRV
DVEESEASSSVSIAHMASATGNVCFDELDVDGKFVRLLNTSEEDQAMVGYEMTRVISDTS
ATYKFTPKYVLKAGQAVTIWASNAGVGFNPPTDLVWKGQTSWGTGEDVKVALTDPQGEEV
AVRSTVFKMASAEDEEGEEDEEEEEEEETMEVMEEDLFHQQGDPHPAKRGCSIM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcaacttcgactccggccgggcaaagaataagctcccgcattgccggcagc
actcctctgagccccacgaggatttcccggctgcaagaaaaagaagagctctgcaatctg
aacgaccgactggccatttacatcgacaaagtccgaagccttgaatccgagaatagcgtt
ctccatttgcaaatcaccgagaaggaagacgtccgaaatcgggagcttacgggtttgaaa
tcattgtacgaaaccgagctcgctgacgccaggagatccctcgatgacacggccagagac
cgcgcgaggctgcaaatcgaattgggaaagatcaaatccgagcatgagcagttactacag
acccaagccaagaaggatgcggacctctccggcacccaggcccggctgaaggacgcggag
gctctgctcaactccaaagaggcggcgctggccacttcgctgaccgagaggaggacccta
gaggccgccatggctgacctgcaggcccaggtccaggagctggacacaggtctgatcgca
gccaggaagcagctgggcgaggagaccctgctccgtgtggacctggagaaccgatgccag
agcctgatggaggatctggagttccgcaagaacatgtttgaggaggaggtaaaggacacc
aggcgcaggcatgagacgcgtctggtggaggtggactcgggcagacagatggactacgag
ttcaagctgcagcaggggctgaccgacatgcggcagcagcaggaagagcaagtcaagctc
tacaaggacgagatggagacgacctacgtggccaagctggagaacgtgcgtatgtcctcg
gagatgaacagcagtgctgccagcatggctcgggaggagctgaaggagtctgcgctccgt
gtggagagcctggccgcccagctgtccagcatgcagaaggagactcgcggttggcaggag
cgcatcagcgagctggagaatgccctgtctcaggagcgtgacatgagccggcggattctg
gccgacaaggagcgcgagatctctgacatccgcgccaagatgcagcagcagctggatgac
tacgagcagctgctggacgtcaagctggccctggacatggagatcaacgcctaccgcaag
ctccttgaaggagaggaggagaggctgaatctgtcccccagtccatcgtcccgtgtgact
gtgtctcgggcgtcctcatcacggagcgtgcgcaccacacggggcaagcggaagcgcgtg
gacgtggaggagtcggaggccagcagctccgtcagcatcgctcacatggcctcggccact
ggcaacgtctgcttcgatgagctggacgtggacggcaagttcgtccgcctgctcaacacc
tccgaagaggaccaggccatggtggggtatgagatgaccagagtgatcagcgacacctcg
gccacctacaaattcacccccaaatacgtcctcaaggctgggcaggcagtcactatctgg
gcctcaaatgctggagtgggcttcaaccctcccactgacctcgtctggaagggccagacc
tcctggggcactggagaggacgtgaaggtggcgctgactgaccctcagggagaggaagtg
gctgtgaggagtacggtgttcaagatggccagtgctgaagacgaggagggtgaggaagac
gaggaggaggaggaggaggaggaaaccatggaggtaatggaggaagatctcttccaccag
cagggagatccccatcctgccaagagaggttgctccatcatgtaa
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