Clupea harengus (Atlantic herring): 105890158
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Entry
105890158 CDS
T09045
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105890158 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105890158 (myd88)
04621 NOD-like receptor signaling pathway
105890158 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105890158 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
105890158 (myd88)
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Gene cluster
GFIT
Motif
Pfam:
TIR_2
Death
TIR
Motif
Other DBs
NCBI-GeneID:
105890158
NCBI-ProteinID:
XP_012671584
Ensembl:
ENSCHAG00000004163
UniProt:
A0A6P3VGI1
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Position
17:complement(2417245..2421749)
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AA seq
286 aa
AA seq
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MAYCSETSVDFYKIPLVALNHSVRKKLGLYLNPPSTVAADWTSIAEMMGFSYLEIKNYET
CHNPTLKILDDWQARCSDANVGKLLSLIETADRSDIICDIKPLIEEDCIKHLKKLQDPPV
QVPEIHSSIKTPEPYAMTMRDDPRGESPEMFDAFICYCQNDFDFVFEMIRQLEETDHKLK
LCVFDRDVLPGTCVWTITSELIERRCRRMVVVISDDYLDSEACDFQTKFALSISPGARNK
MLIPVIFKPMKRPFPSILRFLTVCDYNRPCTQTWFWKRLAKALSMP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcatattgtagtgagaccagcgttgacttctacaaaatacccttagttgccttaaat
cacagtgtgagaaaaaagcttggactttacttaaatccgcccagcactgtcgcggcagac
tggacttcaatcgcagagatgatgggcttttcgtacctcgagattaaaaattatgaaacc
tgccacaatcctactctcaagattttagacgactggcaggcgcgctgctcagacgcaaat
gttggaaagttactgtcgctaatcgagactgccgacagaagcgacataatctgtgatatc
aaaccactaatagaggaggactgcatcaagcatctgaagaagctacaggaccccccagtt
caggtcccagagattcacagctctatcaaaactccagaaccttatgccatgaccatgcga
gacgatccgaggggtgaatctcctgagatgtttgatgccttcatctgctactgccagaac
gattttgactttgtcttcgagatgatcaggcagctggaagagacggaccacaagctgaag
ctgtgtgtgtttgacagggacgttctgcctggaacatgtgtgtggaccatcaccagtgag
ctcatcgagaggagatgtaggaggatggtggttgtgatttccgatgactacctggacagc
gaggcatgtgatttccagaccaagttcgctctcagcatttccccaggtgctcgcaataaa
atgcttattcctgtgatcttcaagccaatgaaaaggccctttccaagcattctacgtttc
ctgacagtctgtgactacaacaggccctgcacacagacttggttctggaaacggctggct
aaggccctgtccatgccctga
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