KEGG   Clupea harengus (Atlantic herring): 105890211
Entry
105890211         CDS       T09045                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04144  Endocytosis
char04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105890211 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    105890211 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105890211 (chmp4c)
   03400 DNA repair and recombination proteins [BR:char03400]
    105890211 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105890211 (chmp4c)
Membrane trafficking [BR:char04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    105890211 (chmp4c)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    105890211 (chmp4c)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105890211 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   105890211 (chmp4c)
SSDB
Motif
Pfam: Snf7 DH_2 DUF6437 DUF4778 Phage_TAC_12 YxiF
Other DBs
NCBI-GeneID: 105890211
NCBI-ProteinID: XP_012671635
Ensembl: ENSCHAG00000017620
UniProt: A0A6P3VHI7
LinkDB
Position
17:complement(7554978..7557966)
AA seq 229 aa
MSKISKMFTGSSSKSSSSSSSKSKHRSRGEPSSREAIHKLRETEAMLTKKQEYLERKIDE
EIAIAKKNGTRNKRAALQALKRKKRYEQQLTQIDGTLSTIEFQREALENTTMNTEVLMNM
GYAAKAMKKVHQKIDMDKIDTLMDDIQEQQDLSREINDAISRPFGDEFDEDELLAELAEL
EMEEGSKRMAKLPSVPSGRLPSERSRHRTHSKKRVEDDADMKRLASWAV
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagtaagatttcaaaaatgttcacaggttcgagctccaaatctagctcatctagctcc
tcgaaatcaaaacatcgatccaggggagaaccgagttcccgagaagccattcacaaatta
cgggagactgaggctatgcttactaaaaaacaagagtatttggaacgtaaaatcgacgag
gaaattgcgattgctaagaagaatggcaccagaaataagcgagccgctctgcaagcgcta
aagaggaagaagcgctacgagcagcaattgacgcagatcgatggcacgctctccaccatc
gagttccaaagggaggccctggagaacaccaccatgaacacggaggtgctgatgaacatg
ggctacgcagctaaggccatgaaaaaagtccatcagaaaatagacatggataagattgac
acactaatggatgacattcaagaacaacaggatctatctagggagatcaatgatgccatt
tcacggccttttggagacgaatttgatgaggatgaactgttggctgagctggcagagctg
gaaatggaggagggctccaagcgcatggcgaagctgcccagtgtgccctcgggcaggttg
ccaagcgagaggtccaggcatcgcactcattcaaagaagcgtgtggaggatgatgctgat
atgaaacggcttgcatcctgggcagtctaa

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