Clupea harengus (Atlantic herring): 105890218
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Entry
105890218 CDS
T09045
Symbol
slc27a6
Name
(RefSeq) long-chain fatty acid transport protein 6
KO
K08749
solute carrier family 27 (fatty acid transporter), member 6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105890218 (slc27a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105890218 (slc27a6)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
105890218 (slc27a6)
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105890218
NCBI-ProteinID:
XP_012671646
Ensembl:
ENSCHAG00000012692
UniProt:
A0A6P3VH41
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Position
12:complement(12519465..12544405)
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AA seq
650 aa
AA seq
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MLRLVFGAVGITLLCKILKGCLSQTSVMLSSVTWVTALLAGIFSGHIAQRLHFPYFWKDL
FFLLKVIRYGIQLEIYKWTKRVVTVIDRFVQQAIEIPNKPFLIYEGVTYTYQDIDKRSNK
VAQVFAERGTVKKGDTVALLMSNEPDFISVWFGLSKLGCSVAFLNINIKSRSVLHCFNCC
GAKVLVVGADLLDTLEDILPSLQEDNILVWAMKKETSYPGVNTLIDKMEEASDKPVPAEL
RAITSLKSPNLYIFTSGTTGLPKAAVITHLQSLKAAAGFWAYGGSADDVIYTTLPLYHSA
ASLVGIGGTIEMGATCVLKKKFSASQFWSDCRKYNVTIFQYIGELCRYLCNQPKGENDKQ
HKVHMGVGNGLRQDVWREFHQRFGKVRMCELYGSTEGNLCFMNHIGKIGVVGRSNFIYKL
LFKYVLVKYDMVRDEIVRNQRGFCESVKKGETGLLLSKINSQSPFFGYAGSKQLTENKIL
RDVFTKGDSYFNTGDLMAENDEDFISFKDRVGDTFRWKGENVATTEVTEILGLVDFIQEV
NVYGVEVQGNEGRAGMAAIIVRPDFTFDGKKLFDLAVMDLPSYARPLFIRLQESMEMTST
LKQQKYQLVAGGFNPSTITDPIYFLDYSQKCYVPLTTSVYESIVEGQCKL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttacggttagtcttcggcgcagtcggcataacattgctgtgcaaaattctaaagggt
tgtttgagtcaaacatcagtgatgctctcttcagtaacatgggtgacagcactgttggcg
ggtatcttttcggggcacattgcacagagactgcattttccttacttttggaaagacctc
ttcttcttgctgaaagtaatcagatatggcattcagttggaaatatacaaatggactaaa
agagtggtgacagtcattgacagatttgttcaacaggctatagaaattcctaacaagccc
ttccttatttatgagggagttacttacacctatcaagacattgataaacgaagcaacaag
gtggcacaggtgtttgcagaacggggaaccgtgaagaaaggagatactgttgctctgctg
atgagcaacgagccggatttcatatctgtctggttcggattgagcaaactggggtgttct
gtggcttttcttaacataaacattaaatcaagatccgttttgcattgtttcaactgctgt
ggagccaaagttctggttgtcggtgcagacttgttggacaccctggaggacattcttccc
agcctccaagaagacaacatcttagtctgggccatgaagaaggagacatcttatccaggg
gtgaacactctcatcgacaagatggaggaagcctcggacaaacccgtcccagctgagctt
cgggctatcacttccctcaaatcaccgaatctttacatcttcacctcaggaaccactggg
ctccccaaagcggccgtgatcacacacctgcagtcactgaaagcagcggcgggtttctgg
gcgtacggcggctccgcagacgatgtgatctacacgaccctgcccctgtaccacagcgct
gcttccctggtcggcatcggagggacgattgaaatgggtgccacgtgtgtattgaagaag
aagttctctgcctcacagttctggagcgactgcaggaagtacaacgtaaccatcttccag
tacatcggagagctctgcagatatctctgtaaccagcccaagggagagaatgacaagcag
cacaaagtgcacatgggtgttgggaacggcctgcggcaggatgtgtggcgtgagttccac
cagcgcttcggcaaggtccgcatgtgtgagctctatggctccaccgagggcaacctctgc
ttcatgaaccacattggcaagattggcgtcgtcggacgctccaacttcatctacaagctc
ctgttcaagtatgtcctggtgaagtacgacatggtgagagacgaaattgtgaggaaccag
cgggggttctgtgaatcagtcaagaaaggtgaaacgggactgctgctgtccaagataaac
tcccaaagtccgttctttggctacgctggcagtaaacagctgacggagaacaagatcctg
agagatgtgtttaccaaaggggactcttactttaacacgggggacctcatggccgaaaac
gatgaggacttcatctccttcaaggaccgagttggagacaccttcaggtggaagggtgaa
aatgtggccactacagaagtgactgagatcctcggcctcgtagactttattcaggaggtc
aatgtgtatggggtggaggttcaaggaaatgagggaagagcagggatggccgccatcatt
gtaagacctgacttcacgttcgatggaaagaagctgttcgaccttgcagtcatggacttg
ccttcttatgcacgccctctcttcataagactacaggagtctatggaaatgactagcact
ttgaagcagcagaaatatcaactggtggcaggtggattcaacccttccactataacagac
cctatctacttcttggattactcccagaaatgctacgtcccactgaccacctcagtctac
gaatccattgtagagggccagtgtaagctatag
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