KEGG   Clupea harengus (Atlantic herring): 105890220
Entry
105890220         CDS       T09045                                 
Symbol
eloca
Name
(RefSeq) elongin C paralog a
  KO
K03872  elongin-C
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105890220 (eloca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105890220 (eloca)
   03400 DNA repair and recombination proteins [BR:char03400]
    105890220 (eloca)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     105890220 (eloca)
   Cul5 complex
     105890220 (eloca)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105890220 (eloca)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 105890220
NCBI-ProteinID: XP_012671644
UniProt: A0A6P3VGM0
LinkDB
Position
17:complement(5280458..5283199)
AA seq 112 aa
MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 339 nt   +upstreamnt  +downstreamnt
atggatggtgaggagaaaacctatgggggctgtgaaggcccagatgctatgtatgtgaag
ctgatctcttcagatggccatgagttcatagtgaaaagagaacatgccttaacctctggg
acaattaaggctatgttgagtggacctggtcaatttgcggaaaatgagacgaatgaggtc
aatttcagagagatcccatctcatgtcctctccaaagtgtgcatgtacttcacctacaaa
gtgcgatacaccaacagctccacggagatccccgaattcccaattgcccctgagattgca
ctggaactgttaatggctgccaacttcttagattgttaa

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