Clupea harengus (Atlantic herring): 105890228
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Entry
105890228 CDS
T09045
Symbol
ncoa2
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105890228 (ncoa2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
105890228 (ncoa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
DUF1518
SRC-1
Nuc_rec_co-act
NCOA_u2
DUF4927
PAS_3
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
105890228
NCBI-ProteinID:
XP_031439755
Ensembl:
ENSCHAG00000021282
UniProt:
A0A6P8GPS4
LinkDB
All DBs
Position
17:complement(4680364..4776686)
Genome browser
AA seq
1515 aa
AA seq
DB search
MSGVGENSSDPGRAEAQKRKECSSELLGPSTKRSTEKRNREHENKYIEELAELIFANFND
IDNFNVKPDKCAILKETVKQIRQIKEQEKAAAANEEEVQKADVSSTGQSVIDKDALGPMM
LEALDGFFFVVNMEGNIVFVSENVTQYLRYNQEELMNTSVYSILHVGDHAEFIKNLLPKS
LVNGTPWSGENPRRNSHTFNCRMLVNPHSEPEDEQQEQEVQQKYETMQCFAVSEPKSIKE
EGEDFQSCLICVARRVPMKERPIMPTHESFTTRQDLQGKITSLDTSSLRASMKPGWEDLV
RRCIQRFHLQNDGEMSFAKRHQQEVLRLGQAFSPIYRFSLADGTIVSAHTKSKLVRSPTT
SEPQLYMSLHILQREQPVCGMPQEMGAGQGLGKPLNPVSSMPNPGGPQGQDTTVSSNISS
SSNSGFPAQGGHREPGASMGPSPGYRFNCPGPAGTGQGGTYGGLKMNSPSQGSPSMLSPR
QRGSPGAAGSPRLPPPQFSPASAGGGTVTGGNSSGGSSSLHSPAPGHGYTSSSLNALQAL
SECHTVSLGQSGLGSPDRKTMGSPASAGLSSHMLSKMAAGAAGAAADGFGSDQQQNQNQA
MDSSQSQRHQSEDGSDPKDEKDPSLGGFGGPGAGDSAGDAQSRLHDSKGHTKLLQLLTTK
TEPIEPPSPPGDPKDSSSGGPMGLGLGGPGGMGGPGPTGAHATSLKEKHKILHRLLQNST
TPVDLAKLTAEATGKEMGPDGAPGGNGGSTNVGGLGELNPKQEPISPKKKDNALLRYLLD
KDDNTKIKVEPGGEIKLESGGKMPMVKTEKTEMGYDRAEPSSELDDILDDLQNSQPGLFG
EARPQSLPAAMDKQSIINDILQMSQDAGAAMGPNQQHKAFPPMGQGNFGGPRPGQPGRAP
PARSMSLDINMATKGSPGQFPLMRNNSPYSMMQQQGMMGNHGVMGNQAGMVNPGVRGANL
QQEPWGPHGPGVNSSAPTSASAAQALQQGAMHGRMVANAGGAGGQMRPNSQPGPRQMLQQ
QMMPGGQTMDIGMVAHQFSQQQVPPNQTAPWPDSMMPIDQVSFAAQNSDGGADEGALLSQ
LYSVLKDADCLDEIDKALGIPALVGQSQDHGQDPGQDPGLLMEQKLPVYPPQQYGHPPGH
MTQGGYGPMQDPTGAPGFHGMPVQMGQRPGYPMPLRMQQRPGLRPPGVVPNQPNSLRLQL
QHRLQAQQNRQPVLSQMAGVSNMNLPLRPNVPNQGTINAQMLAQRQRELLSNHLRQRQQQ
VQQAQQQQQQAQQQQQQAQQQRTLAMRAQGLNLPPNIAAAAAAAGLPGALGNARMPQASP
QQFPYPPSYGTGLASPPSCTSPYSPVSPNLPPPPPAPQLLAHSSLHGSQMGLANQGMMGN
MGGQFGGVMSPQMQHSAFQFPSSGMSQQPDGGFGGATTPQSPLMSPRMGHAQSPMMQQGQ
GSASFQASPDMNGWPPGNSMFTQQSPPQFGQQSNGNMYNGNSMNLNVSMATNASSMGQLG
SQMNVTSMASDQKYC
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgtaggagaaaactcttcggaccctggccgggcagaggctcagaaacggaaa
gaatgttcctcagagctgctgggcccaagcaccaaacgaagcactgaaaagcgcaaccgg
gagcacgagaataaatacatcgaagagctcgccgagctgatcttcgccaacttcaacgac
attgacaacttcaatgtcaagcctgacaaatgtgcaatcttaaaagagactgtgaagcag
attcgtcagataaaagagcaagaaaaggctgccgcagccaacgaagaggaggtgcagaag
gctgatgtgtcgtcgacaggccaaagtgttattgacaaagatgccctcggacccatgatg
cttgaggccctggatggcttcttcttcgtggtgaacatggagggcaacatcgtgtttgtg
tcggagaacgtgacgcagtacctgcgctacaaccaggaggagctgatgaacaccagcgtg
tacagcatcctgcacgtgggagaccacgccgagttcatcaagaacctgctgcccaagtcc
ctggtgaacgggactccatggtcaggcgagaacccgcggcggaacagccacacgtttaac
tgccggatgctggtgaacccgcacagcgagccggaggacgagcagcaggagcaggaggtc
cagcagaagtacgagaccatgcagtgcttcgccgtgtccgagcccaagtccatcaaggag
gaaggagaggatttccagtcgtgtctgatctgtgtggcgcggcgggttcccatgaaggag
agacccataatgcccacacacgaaagcttcaccacccgccaggatctccaaggtaagatc
acctccctggacaccagctcgttgcgggcctccatgaagcccggctgggaggacctggtg
cggcggtgcatccagaggttccacctccagaacgacggcgagatgtccttcgccaaacgc
caccagcaggaggtgctgaggcttgggcaggcgttcagccccatctaccgcttctcgctg
gcggacggcaccatcgtgtctgcacacaccaagagcaagctggtccgctcccccaccacc
agcgagccccagctctacatgtctctacacatcctacagagagagcagccggtgtgtggc
atgccccaggagatgggcgccgggcaggggctgggcaaacccctgaaccccgtctcctcc
atgcccaacccagggggcccccagggccaagacaccacagtcagcagcaacatctcctcc
tcttccaacagcggcttccctgcccaagggggccacagggagccaggggcctccatgggc
ccctcgccgggctatcgcttcaactgcccaggccccgcggggacaggccagggtggcacc
tacgggggactgaagatgaacagcccttctcagggcagccctagcatgctgtcaccgcgg
caacggggcagcccaggcgccgctgggtcgccacggctacccccgccgcagttctccccg
gcgtcggccggtggaggcacggtcaccggcggcaacagcagcggtggcagtagcagtctg
cactcgcccgcgccgggccacggatacacaagcagctccctcaacgccctgcaggcgctc
agcgagtgtcacactgtcagcctgggtcagagtggcctcggctcgccggacaggaagacc
atgggctcgcccgcctcggccgggctcagctcacacatgctcagcaagatggccgccggg
gcagcgggagctgcggcggacgggttcggatccgaccagcaacagaatcagaaccaggcg
atggattctagccagagccagaggcatcagtcggaggatgggtccgacccaaaggacgag
aaggaccccagtttaggcgggttcgggggacctggggcaggcgattcggccggggacgcc
cagagccgtctccacgacagtaagggccacaccaagctgctgcagctgctcaccaccaag
acggagcccatcgagccgccctccccgcccggggaccccaaggactcctcgtccgggggc
cctatggggctagggctcgggggccctggtggaatgggaggccccggacccacaggggcc
catgccacctccctaaaggagaagcacaagatcctccaccggctgctccagaacagcacg
acgcccgtagaccttgccaagctgacggccgaggccaccggcaaggaaatgggcccggac
ggcgccccagggggcaacggaggctccaccaatgtcgggggtcttggggagctgaacccc
aaacaggagcccatcagccccaagaagaaggacaacgcactgctgcgctacctgctcgac
aaggacgacaacaccaagatcaaggtggagcccggcggagagatcaaactggagtctggc
ggcaagatgccaatggtgaagaccgagaagaccgagatgggctacgacagagccgagccg
tcgagtgagcttgatgacatcctggatgacctgcagaacagccagccgggtcttttcggc
gaggcccggccccagtccctgccggctgccatggacaaacagtccatcatcaacgacatc
ctgcagatgagccaggacgccggcgccgccatggggcccaaccagcagcacaaggccttc
ccccccatgggccaaggcaactttggcggccccagaccgggtcagccaggcagagccccc
cctgcaagaagcatgtctctggacatcaacatggctaccaagggctcgccaggccagttc
cccctcatgaggaacaacagcccctacagcatgatgcagcagcaaggcatgatgggaaat
cacggggtcatgggcaaccaagccggcatggtcaacccaggtgtgaggggggccaacctg
cagcaggagccctggggcccccacggccccggcgtgaacagctcggccccgacttcagcg
tctgcggcccaggctctccagcagggggcgatgcacgggcgcatggtggccaacgcgggg
ggagccggagggcaaatgaggcccaacagccaaccgggtccgagacagatgctgcagcaa
cagatgatgcctggaggacaaacaatggatataggcatggtggcacaccagttctcccag
cagcaggtgccgcccaatcagacagccccgtggcccgacagcatgatgcccattgaccag
gtgtcatttgccgcccagaatagtgacggcggtgctgatgagggggccctgctcagtcag
ctgtacagcgtgctgaaggacgcagactgcctggacgagatcgacaaggccctcggcatc
cccgctctggtgggacagagtcaggaccatggtcaggaccccggtcaggatcccggtctg
ctgatggagcagaagctgccagtctaccctcctcagcagtacggccatccccccggtcac
atgacgcagggcggctacgggccgatgcaggaccccacgggggcgccaggcttccacggc
atgccggtgcagatgggccagaggcctggctaccccatgccgctgcgcatgcagcagagg
cccgggctccggccgcccggcgtggtgcccaaccagcccaactcgctccggctgcagctg
cagcaccgcttgcaggcccagcagaatcgtcagccagtactgagccagatggcgggagtg
tcaaacatgaacctacctctcagacccaatgtacccaatcaggggaccatcaacgctcag
atgctagcccagcggcagcgtgagctgctgagtaaccacctgcgccaacggcaacagcaa
gtccagcaggcgcagcagcagcagcagcaggcccaacagcagcaacagcaggcccaacag
cagcgcaccctcgccatgagggcccagggcctcaacctgcctcccaacatagccgccgcc
gcagctgccgccggcctgcccggcgccctgggcaacgcccggatgccccaggccagcccc
cagcagttcccctacccacccagctacggtacaggcctggcctctccgccctcctgcacc
agcccctactccccggtctcccccaacctccccccccctccgccggccccccagctcctc
gcccacagctccttgcatggctcccagatgggtctggctaaccagggaatgatgggaaac
atgggcggacagtttgggggcgttatgagcccccaaatgcagcacagtgcctttcagttt
cccagctcaggtatgagtcagcagcctgatgggggtttcggaggagccaccaccccccag
agccccctcatgtccccccgcatgggccacgcccagagtcccatgatgcagcagggccag
ggcagcgccagcttccaggcctcgcccgacatgaacggctggccgccggggaacagcatg
ttcacacagcagtctccacctcagttcggccagcagtccaacggcaacatgtacaacggc
aacagcatgaacctcaacgtctccatggcaaccaacgccagcagcatggggcagttgggc
agccagatgaacgtcacgtccatggcctccgatcagaaatactgttga
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integrated database retrieval system
