Clupea harengus (Atlantic herring): 105890249
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Entry
105890249 CDS
T09045
Symbol
jph1a
Name
(RefSeq) junctophilin-1a
KO
K19530
junctophilin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
105890249 (jph1a)
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Gene cluster
GFIT
Motif
Pfam:
MORN
Motif
Other DBs
NCBI-GeneID:
105890249
NCBI-ProteinID:
XP_012671700
Ensembl:
ENSCHAG00000013949
UniProt:
A0A6P8GXN5
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Position
17:3433662..3475459
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AA seq
692 aa
AA seq
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MTGGGRFDFDDGGTYCGGWEDGKAHGHGICTGPKGQGEYAGSWSHGFEVVGVYTWPSGNT
YQGYWSQGKRHGLGVETKGKWIYRGEWSHGFKGRYGVRQSHSTPARYDGTWSNGLQDGYG
IETYGDGGTYQGQWMGGMRHGYGVRQSVPYGMATVIHSPLRTSLASLRSVQSNGTLQQDP
PGADTPVGTRGGFVLNFHSDSEVVTKKKGLFRRGSLFGSLRQLRKSDSRTSISSKRSSAR
SDATTMSRISSSDANSTISYGEGDGAGDGDYAAPEDHVDATTTESYMGEWKNDKRCGFGV
SERSNGMKYEGEWLNNRRHGYGGTILPDGTKEEGKYKNNVLVRGIRKQLIPLKNPKTKEK
VDRAVEGARRAATIARTKVEIAASRTSHARTKSEAADQSALAALHDSDLARTVASELSPS
FLQPGLDYIKQRFAEPDETAVEVPEEKPKPESEKSTKDKESPHFYRKGTTPPHSPARSPG
TPPPSPTKKASQLSNSSSEARKISKDESVSASRKISKDQSAIRKISKDERASEAAKPAHP
AAHVSFHAQHDEAPPKPPKMADPEPVRQGNGLLHRQHQYHSYYVKTPVKAAPPPEEPEDE
EPEEPTQMDLARSPPPFKFKTPKPATPGAAGAASAVAKSELKPKPKSLSETKKASMEIPE
IVEEESGPNSILVAMVMLLNIGLAIIFVHFLT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggcggacggttcgacttcgacgatggaggcacttattgcggaggctgggaa
gatgggaaagcccatggacacggcatctgcactggacctaagggccaaggcgaatacgcc
gggtcctggtcacacgggttcgaggtagtaggggtttacacctggccgagtgggaataca
taccagggttactggtcgcaaggcaagcggcatgggcttggggttgaaaccaagggaaag
tggatctatcgcggagagtggagtcatgggtttaagggtcgatacggagttcgccaaagc
cacagtacacctgctagatacgatggaacttggagtaatggtctgcaagacgggtatgga
atcgagacctatggggatggtggtacgtaccagggccagtggatgggggggatgcgtcat
ggttacggggtgcgtcagagtgtgccttatgggatggcaacggtcatccactcaccgctg
cgcacctcgctggcctcactgaggagcgtgcagagcaacggcacgctgcaacaggacccg
cccggcgctgatacccccgtgggcacgcgcggcggcttcgttctcaacttccacagcgat
agcgaggtggtgacgaagaagaagggcctgttccggcgtggctcgctcttcggtagcctg
cggcagctgcgcaaatctgactcgcggacgtccatctccagcaagcgcagctccgcgcgc
agcgacgccaccaccatgagccgcatcagctccagcgacgccaactccaccatcagttac
ggcgagggcgacggcgctggggacggagactacgccgcacccgaggaccacgtggacgcc
accaccaccgagtcctacatgggcgagtggaagaacgacaaacgctgtggcttcggcgtc
tccgagcgctccaacggcatgaagtacgagggcgagtggctcaacaaccggcgccacggc
tacggaggcaccatcttgcccgacggcaccaaggaagaagggaaatacaaaaataacgtg
ctcgtgcgcggcatacgcaagcagctaattccccttaagaatcccaaaaccaaagagaaa
gtggaccgggccgtggagggggcgcggagggccgcaaccatcgcaagaacaaaagtggaa
atagcagcatcaaggacctctcatgcccgtaccaagagtgaggcagctgaccagtcagct
ctagctgccctccatgactcagacctcgcccgaacggtggctagcgagctctcgccaagc
ttccttcagccaggccttgactacatcaagcagaggtttgccgagcctgacgagactgct
gtagaggtgccagaggagaagccgaaaccagagtctgagaagtccaccaaggacaaggag
agcccacacttctaccgcaaaggcaccacccccccacactcccctgcccggagccctggc
acgccgcccccctcacccaccaagaaagcctcccagctctccaacagcagcagcgaggca
cgcaagatcagcaaagacgagagtgtcagcgccagccgcaagatcagcaaagaccagagc
gccatccgcaagatcagcaaggatgagagagcctccgaagccgccaaacccgcccatcct
gcagctcacgtgtccttccatgcccagcatgatgaagcgccccccaaaccgcccaagatg
gccgatccggagccggtgaggcagggtaacggcttgctgcaccgccaacatcagtaccat
agctactacgtgaagacgcccgtcaaggcggcaccgccccctgaggagcctgaagacgag
gagccggaggagcccacgcagatggacctggcacgctctcccccgcccttcaagttcaaa
acgcccaaaccagccacgcccggtgccgccggtgccgccagtgccgtggccaagtctgag
ctgaaacccaagccaaagagcctatcagaaaccaagaaagccagcatggagattcccgag
attgtagaggaagagtcaggtcctaattccatattggttgccatggttatgcttttgaat
attggccttgcaattatttttgtccatttcctgacatga
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