Clupea harengus (Atlantic herring): 105890263
Help
Entry
105890263 CDS
T09045
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105890263 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105890263 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105890263 (gars1)
03029 Mitochondrial biogenesis [BR:
char03029
]
105890263 (gars1)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
105890263 (gars1)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
105890263 (gars1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105890263 (gars1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
105890263 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
DUF5915
OS-D
Motif
Other DBs
NCBI-GeneID:
105890263
NCBI-ProteinID:
XP_012671719
Ensembl:
ENSCHAG00000010176
UniProt:
A0A6P3VH59
LinkDB
All DBs
Position
17:2607483..2617555
Genome browser
AA seq
746 aa
AA seq
DB search
MLRRAASALLKTSTELTTLLSVPPTPKPLFSFLLIRPFSLSVCLRKKKKQNSLWLQLSEG
QKMDSNIEEVLAPLRQSVKEQGELVRQMKADGVPDVDVAKAVAELKARKRTLEAKELSLQ
PKDDIVDRTKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQEE
QILEIDCTMLTPETVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCAA
EKKAEMDDVITQMDNYTQQELTDLFVKYNVKSPITGNDLTPPMLFNLMFQTSIGPGGNMT
GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEH
FVDPNEKVHPKFSNVADLNILLYSSKAQTSGQSASVMNLGEAVKQGVINNSVLGYFIGRI
YLYLTKVGVASDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLTCHA
KATKVSLAAEKPLKEPKVVNVVQFEPNKAAIGKAYKKEAKLAMEYLAACDECYITDQEKL
LSENGEFTVETEGKTFKITKDMVAIKRFQKTLHVEEVVPNVIEPSFGIGRIMYSIFEHTF
HTRGGDEQRTYFSFPATVAPYKCSVLPLSQNQEFVPFVRELSEALTKNGVSYKVDDSAGS
IGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPNIIRDLANGA
TTWVEIERKYPIFEGQETSKKDTTEE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggagagcagcatcagcactgctgaaaaccagcactgagcttaccaccctcctc
tctgtgcctcctaccccgaagcccctctttagtttccttcttatcaggccgttctccctc
tcggtctgcttgcgtaagaagaagaagcagaatagtctttggttgcagttgtctgaagga
caaaagatggatagtaatatcgaagaggtgctggctcccttgaggcaatctgtgaaggaa
cagggcgaattggttcgtcagatgaaggccgatggggttcctgatgtggatgttgccaaa
gcagtggcggaattgaaggcgcggaaaagaaccctggaagccaaggaactttcccttcag
cccaaagatgatattgtggacagaacaaagatggaagatactctgaagaggcgtttcttt
tatgaccaggctttctccatctatggtggtgtaagtgggctgtatgactttgggcccgtc
ggctgtgctctgaagaacaacatcctgcaggcatggaggcaacacttcatccaggaggag
cagatcctggagatcgactgcaccatgctcacccccgagactgtcctcaagacctctggg
cacgtggacaagtttgctgactacatggtgaaggacgtcaagaatggggagtgcttccgt
gctgaccatcttctgaaagcgcatctccagaagctgatgtctgacaagaaatgtgctgca
gagaagaaggctgaaatggatgatgtcatcacccagatggacaattacactcagcaggag
ttgacagatctgtttgtcaaatacaacgtgaagtctccgatcacaggaaatgacctcaca
cctccaatgttattcaatctgatgttccagacctctattggccctggaggaaacatgacc
ggctacttgaggccagaaactgctcagggaatcttcctcaacttcaagcgtctgctggag
tttaaccagggcaagctaccgttcgctgctgctcagatcggaaactctttcaggaatgag
atctcgcctcgctctggcctcatccgagtcagagagtttaccatggccgagattgagcac
tttgtcgacccaaatgaaaaggttcaccccaagttctccaacgtggcagacctgaatatc
ttgctgtactcgtccaaggcacagaccagtgggcagtctgcctctgtgatgaatctgggg
gaagccgtgaagcagggagtgatcaacaactccgtcctgggctacttcatcgggaggatc
tacctctacctgaccaaagtgggcgtggccagtgataagctacgcttccgtcagcacatg
gacaacgagatggcccactacgcctgtgactgctgggatgccgagaccaaaacctcttac
ggctggattgagattgtgggctgtgctgaccgctcttgctttgacctgacatgtcacgca
aaagcgactaaggtctccctggcagctgagaaaccactgaaggaacccaaagttgtaaat
gtcgtccagtttgagccaaataaggcagccattggcaaagcctacaagaaggaagccaag
ttggccatggagtacctggccgcctgcgatgagtgctacatcacagaccaggaaaagctg
ctcagtgagaatggtgagtttaccgtcgagacggagggaaagactttcaaaatcaccaag
gacatggttgccatcaagaggttccagaagaccctgcatgtggaagaggtcgttcccaat
gtcattgagccgtcctttggcatcggccgaatcatgtactccatcttcgagcacacattc
cacaccagaggtggcgacgaacaaagaacatatttcagttttcctgccactgtggctccc
tacaaatgctccgtccttccactcagccaaaatcaggaattcgtgccgtttgtccgggaa
ttatctgaagccttgaccaaaaacggcgtgtcctacaaggtggacgactccgcagggtcg
atcggtaggcgctacgccaggacggacgaaatcggcgtggccttcggcatcaccatcgac
ttcgatacggttaacaagacgccccacaccgccacgctgagagacagggactcaatgagg
cagatcagagcagaggtgagcgagctgcccaacatcatccgtgacctcgccaatggggcg
accacatgggtggagatagagagaaagtaccccattttcgagggtcaggagacgagcaag
aaggacacgacggaggagtag
DBGET
integrated database retrieval system
