Clupea harengus (Atlantic herring): 105890288
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Entry
105890288 CDS
T09045
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105890288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105890288
03036 Chromosome and associated proteins [BR:
char03036
]
105890288
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
105890288
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105890288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
SAM_2
Motif
Other DBs
NCBI-GeneID:
105890288
NCBI-ProteinID:
XP_031440079
UniProt:
A0A6P8GZ62
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All DBs
Position
17:1237337..1314578
Genome browser
AA seq
681 aa
AA seq
DB search
MQAEDKKDKKKKASLNSRGVTDEYCLRERPKEDPAKMKNKVSSSQVSGKKRPWSWDLYLA
EEVAIAAPLRLFTENQSFPHGRNGFKVGMRLEGIDPLHPSMFCVLSVAEVIGHRLRLHID
GYSECYDFWLNADSPDIRPAGWCEETAHKLHPLKGYKANEFNWEKYLEACNAQTAPKNLF
KAQNSTTTPSKFQVGMKLEAVDRKNPCLVCVASVADVADNRFLVHFDNWDDTYDYWCDAS
SPYIHPVGWCQDHGRPLTAPQGHPNPEHFLWEEYLEDNGASAVQSQAFCMRPPHNFQVNM
KLEAVDRRNPMQIRVSTIVDTEDYRVKIHFDGWHEKFDFWVDSDLPDLHPIGWCARTGHP
LEPPLTQTGISDLKSSVTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINVKKEVVL
PDRLGGEKQITFVPVHFVQKTKRLCAEEEEEEEEEDNDDKEEDGGQMETRAMLSGYEGAS
RLRGRYSSSPRPAAHALVKSEQRDDPSAQGHKLLSPLGKRCRVPSRLAQSTKYLRIKEEE
EEVELNSVITGERNADSLQQALHQSVFLSAMSAHPSRDLPLCWEQHCKLLPGVAGVQASL
VAHWTVDEVADFIHSLPGCVEQAKQFREEQIDGRAFLLLTQRDIVKIMSVKLGPALKIYN
SILMFKHVEDDQSTSSDPNIT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagaggataagaaggacaagaagaagaaagcaagtctaaattcgagaggtgta
acagatgaatactgtttgagagagcgaccaaaagaggatcctgcaaagatgaagaataag
gtgtcctcttcacaagtgagcggtaagaagaggccgtggtcatgggacctgtacctggcg
gaggaggtggccatcgccgcccctctacgtctcttcactgagaaccagtcgttcccccac
ggcaggaatggctttaaggtggggatgaggctggagggtattgacccgctgcacccctcc
atgttctgtgtgctgtctgtggccgaggtgattggccatcgtttgcgtctgcacatagat
ggctactcagagtgctatgacttctggctcaatgcagattctcctgacatcagacctgct
ggttggtgtgaagaaactgctcacaaactccatcccctaaaaggttacaaagcgaatgag
tttaactgggagaagtacctagaggcctgtaatgctcagactgcaccaaagaacctgttc
aaagcccaaaacagtaccacgaccccctcgaaatttcaagttggcatgaagctggaggca
gtggacaggaagaatccctgtttggtgtgcgtggcatcggtggccgacgtcgccgacaat
cgctttctggttcacttcgacaactgggatgatacatacgactattggtgtgatgccagc
agcccctacattcacccagtgggatggtgtcaggaccatggtcgccctctcacagcacct
cagggacaccccaatccagagcatttcctttgggaggagtacttagaagacaatggcgcc
tctgcagttcaaagccaggccttttgtatgagacctcctcacaactttcaggtgaacatg
aagctggaggcggtggacaggaggaaccccatgcagatccgagtgtccaccatcgtcgac
acggaggactaccgggtcaagatccatttcgatggctggcacgagaagtttgatttctgg
gtggactctgacctgcctgacctgcatcccatcggatggtgcgcccgcacaggtcaccct
ctggagccgcctctgacacaaacaggaatttctgacctcaagagctccgtcacccaggga
gtgtgtcccaccccaggatgccggggtgtgggccacatcaaaggcgcgaaatacacagga
caccacagtgccttcggctgtccctactcggacatcaatgtgaagaaagaggtggtgctg
ccagaccggctgggcggcgagaagcagatcaccttcgtcccggtgcacttcgtgcagaag
accaagcggctgtgcgctgaggaggaggaggaggaggaggaggaggacaacgatgacaag
gaggaagatggaggccagatggagaccagggccatgctgtcaggttatgagggggccagt
cgtctgagaggccgctactcctccagcccccgcccggccgcccatgctctggtgaagagc
gagcagagagacgacccctcggctcagggacacaagctgctctcacccctgggcaagaga
tgccgggtgcccagcaggcttgcccagtcgacgaaatatctccgaatcaaagaggaggag
gaggaggtcgagctgaacagcgtgatcacaggggagcgtaatgcagacagtctgcagcag
gccctccaccagtctgtcttcctctctgcgatgtcggcccaccccagcagggacctgccg
ctgtgctgggagcagcactgtaagctcctccccggggtggcgggcgtgcaggccagcctc
gtggcccactggaccgtagacgaggtggccgacttcatccactctctaccaggctgcgtc
gaacaggccaagcagttcagagaagagcaaatcgatggcagagccttcctgctcctgacc
cagagggacatcgtgaagatcatgagcgtgaagcttggcccggccctcaagatctacaac
tccatcctgatgtttaagcacgtcgaggacgaccagtcaaccagcagcgaccccaacatc
acatga
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