Clupea harengus (Atlantic herring): 105890292
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Entry
105890292 CDS
T09045
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X2
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890292 (rnf180b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105890292 (rnf180b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105890292 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
FYVE
zf-C3HC4_4
PcfJ
Yippee-Mis18
Perilipin
Motif
Other DBs
NCBI-GeneID:
105890292
NCBI-ProteinID:
XP_012671763
Ensembl:
ENSCHAG00000014210
UniProt:
A0A6P3VHF9
LinkDB
All DBs
Position
12:6211721..6217972
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AA seq
575 aa
AA seq
DB search
MSRGSKSALDVPLMDETWDSSEYSAPLTILRCRKCRKCLAESTCLLSIGNSGELSTTCSV
WHMNVDTLPDWIQSAVHQARWTVGKLNCPFCGARLGGFNFVNCSRCPCGHEDVVHISKSR
VDHESKCTVYPLRPLRAWGRAGRTDSQDELRDPEGERMVRGSSEGCLPDPQSSCPAILRL
IGTSTPIAPPHRLGAEAEWTDSQAALPDGSSQSLTGFCGISGLSCFGESSLQRFLDLAEV
ETVGEVRPNSEQDSPAPLAGLSPPLSPPLEAAADAAISQAELRGSSELPTTLHSGQQQHL
ELLVGDAMLPEVLLHEAPRLPSIPGSRVPSDRTDGEEEEEEEEWAVAPRVQDAPPNPPRS
TAAAECQLSKREKNRLKSQRRKQRRRERWLRSQLEESQLGFSPLGSEDEEEREGHTCAVC
LDVYFSPHMCQPCGHVFCEPCLRTLAKNRPGSTPCPLCRTVISHVLFQKELNQTAKTFFP
KEYLSRKQTFQKANYAKWPLPHCPKRFRIFWGFQRDAARGGRWQFPNRPFGLDALDLVDM
RAWPFDIDLVIIYVYSIHWILAFLILCFVGYCFFF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggctccaaatcagcgttagacgtgcctcttatggacgagacgtgggattct
tctgagtactcggctcctctgaccatacttcgctgcagaaaatgccgaaagtgtcttgct
gagtcgacctgcttgctgtcgatagggaattcaggggagctgtctaccacgtgcagtgtt
tggcacatgaatgtggacaccttgccagattggattcagtcagctgttcatcaggccagg
tggacagtcggtaagctgaactgtcccttctgtggagctcggcttgggggctttaacttt
gtgaactgctccaggtgtccatgtggccacgaagatgtggtgcacatcagcaagagccgg
gtagaccacgaaagcaagtgcactgtttaccctctcagacccttgagagcatgggggagg
gcgggcaggacggactcccaagatgagctgagagacccagaaggcgagcggatggtaaga
ggaagcagcgagggctgtctgcccgatccacagtcatcctgcccagccatcctcagactg
atcggaacctcaactcccatcgcgcccccccatcgtctcggagctgaagcagagtggacg
gacagccaagccgcccttcctgatggctcttctcagtcgctgactggcttttgtggaata
tctggcctttcctgtttcggggaatcctctctgcagcgcttcctggacctggctgaggtt
gagacggtgggggaggtgaggccgaactctgaacaagactctcctgctccgctggcagga
ttaagcccccccctgtctcctccattagaggctgcagcagacgcagccatcagccaagct
gaactgcgtggctcgtcagagctgcccaccactcttcactcaggtcagcagcagcatttg
gaactacttgttggagatgccatgctgccagaggtgctgcttcatgaggctccgcgcctg
ccatccataccaggaagcagagtcccctcagacaggacagatggggaggaagaggaggag
gaggaagagtgggcggtggctcccagagtgcaggatgcccccccaaacccccccaggtca
acagcggctgcagagtgtcagctcagcaagagggagaagaaccggctgaagagccagcgg
cgcaagcagaggaggagagagcgctggctccgcagtcagctggaggagagccaactggga
ttctcgcctctgggcagtgaggatgaggaggagcgcgaaggccacacctgtgccgtgtgt
ctggacgtctacttcagcccccacatgtgccagccctgtggccacgtcttctgcgagccc
tgcctgcgcacgctggccaagaaccgtccaggcagcacaccctgccctctctgccgcacc
gtcatctcccacgtgctcttccagaaagagctcaaccagactgctaagactttcttccct
aaggagtacctctcaaggaaacagactttccagaaagcaaactacgccaaatggcctctt
cctcactgccccaaacggtttcgcatcttctgggggttccagagagatgctgcccggggt
ggccggtggcagtttcctaaccggccttttggcctggacgccctggacctggtggacatg
agggcctggccctttgacattgacctggtcatcatctacgtctactccatccactggatc
ctggccttcctcatcctttgttttgtgggctactgtttcttcttctga
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