KEGG   Clupea harengus (Atlantic herring): 105890323
Entry
105890323         CDS       T09045                                 
Symbol
map1lc3c
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3C
  KO
K10435  microtubule-associated protein 1 light chain
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04137  Mitophagy - animal
char04140  Autophagy - animal
char04216  Ferroptosis
char04371  Apelin signaling pathway
char04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    105890323 (map1lc3c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105890323 (map1lc3c)
   04137 Mitophagy - animal
    105890323 (map1lc3c)
  09143 Cell growth and death
   04216 Ferroptosis
    105890323 (map1lc3c)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    105890323 (map1lc3c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105890323 (map1lc3c)
   03029 Mitochondrial biogenesis [BR:char03029]
    105890323 (map1lc3c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105890323 (map1lc3c)
Membrane trafficking [BR:char04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    105890323 (map1lc3c)
Mitochondrial biogenesis [BR:char03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    105890323 (map1lc3c)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     105890323 (map1lc3c)
SSDB
Motif
Pfam: ATG8 APG12 DUF4474 V-cyclin_C
Other DBs
NCBI-GeneID: 105890323
NCBI-ProteinID: XP_012671791
Ensembl: ENSCHAG00000020353
UniProt: A0A6P3VGU4
LinkDB
Position
24:complement(5922666..5924194)
AA seq 153 aa
MPPFDKTQHPKPFKQRKSFAIRKHEVAGIRTKFPTKVPVIIERYQREQYLPTLDKTKFLV
PQELTMTQFVTILRNRMTLMPSQAFYLLLHNKGIASMSLTMAQVYKEYRDEDGFLYMTYA
SQEMFGQCLNLTQGSFSAGGAGDFSGTKRFLYN
NT seq 462 nt   +upstreamnt  +downstreamnt
atgcctcctttcgacaagacgcaacaccccaaaccattcaaacagcggaaaagctttgcc
atcagaaaacatgaagttgcggggattcgaaccaaatttccaaccaaagttccggtcata
attgaaaggtatcagcgagagcaatatctaccgaccttagacaagaccaagtttttggta
ccccaggagctcacaatgactcaatttgtcacaattttaagaaaccgcatgactctaatg
ccaagccaagcgttttacctgcttctccacaacaaaggcatcgccagcatgtctttaacc
atggcccaagtctacaaagagtaccgggacgaagatggttttctttatatgacatacgcc
tcccaagaaatgttcggacaatgtttgaacttaacccaggggtctttcagtgcaggaggt
gctggtgatttctccggtaccaaaagatttctttataattaa

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