Clupea harengus (Atlantic herring): 105890375
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Entry
105890375 CDS
T09045
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105890375 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105890375 (hnrpkl)
Spliceosome [BR:
char03041
]
Common components
Common spliceosomal components
hnRNP proteins
105890375 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
105890375
NCBI-ProteinID:
XP_012671851
Ensembl:
ENSCHAG00000023962
UniProt:
A0A6P3VGW3
LinkDB
All DBs
Position
12:13336962..13351744
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AA seq
432 aa
AA seq
DB search
MESEIEQQEGETTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKIIPTLEEYQHYNGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVV
ECIKVILELTSEAPIKGRAQPYDPNFYDETYDYGGFTMMFEERGRRPMGGFPMRGRGGFE
RMPPGGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGGDR
FSHQSYHGNMDDRPNDRRGRPGDRYDSMSGGYDNNSSWEPFQSGGRGSYSDIGGPVITTQ
VTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
QNSVKQYSGRFF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagaaattgagcagcaggagggagagactacgttcagcaacactgatactaac
ggtaaacgcccagctgaagacatggatgaggaacaggccttcaagcggtcccgcaacacg
gatgaaatggtggagcttcgtgtgctgctgcaaagcaagaatgcaggagctgtgatcggc
aaaggtggcaagaacatcaaagccttgcgtacagactacaatgccagtgtatcagtccct
gacagcagtggcccagagcgcatcctgagtgtaagtgcagatatcgaaaccatcggtgaa
attctcctgaagatcatccctactttggaggagtaccagcattacaatggcattgacttt
gactgtgagcttcgcctgctaatccaccagagtctggctggaggcatcatcggggtcaaa
ggtgccaaaattaaggagcttagggagaacacccagaccacaatcaagctcttccaggaa
tgttgccctcattccaccgaccgcgtggttctggtgggagggaaaccggagcgtgtggta
gagtgcatcaaagtcatcctggagctgacctctgaggctccgattaagggccgtgcccag
ccctacgaccccaacttctacgacgagacctacgactacggcggctttaccatgatgttt
gaggagcgcggccgcaggcccatggggggattccccatgcgtgggcgggggggctttgag
cggatgccaccaggcggccgtgggggtcgtcccatgcctccatccaggagggactacgat
gacatgagcccccgccgcggtccaccaccacctccacccggcagggggggacgcgggggc
agcagggcccgtaacctgccccttcccccaccgccgccacctagaggaggaggtgacagg
ttttcacaccagagctatcacggcaatatggatgaccgaccaaacgacagaagaggacgg
ccaggagatcgctatgacagcatgagtggaggctatgacaataattcctcttgggagccc
ttccagtcaggtggccggggatcatacagtgacattgggggaccagtcatcacaacacaa
gtcaccatccccaaagatctggctggctccatcattggtaagggtggtcagaggatcaaa
cagatccgccatgagtcgggagcgtccatcaagattgacgagcctcttgagggttctgag
gaccgcatcatcacaatcacgggcacacaggatcagattcagaacgcacagtacctactg
cagaacagcgtgaagcagtactctggccgcttcttctag
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