Clupea harengus (Atlantic herring): 105890404
Help
Entry
105890404 CDS
T09045
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X4
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105890404 (zc3h13)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105890404 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105890404
NCBI-ProteinID:
XP_031414288
Ensembl:
ENSCHAG00000015349
UniProt:
A0A6P8EEA5
LinkDB
All DBs
Position
21:complement(1937696..1949528)
Genome browser
AA seq
1861 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSTSTTPSRRPSVFERLGPSTGGNAAETHCRNWLKTGNCSYG
NTCRYTHGTQPRGKGFSGTFSRSAERPTGDLRERMKNKRQDVEADAQKRDPEEPTSPTTR
QRDSSRGRHREKEDIKITKERTPASEEEPAEWEGTREDSDNGDYDYELSLEMKRQKIQRE
LMKLEQENMDKREEIIIKKEEPTSKNRTSMSKASPERGSSKGSPSSRKSSGSPKYKASGK
SAGSVKKEKSSSSSVISSPLSDQARTEESEGRFSKGSHGKKKGPRTPSPPPPAPAPVETH
VVGKKHKGKHKNKEKSEDRAKEGKDRGRDVDKHKEKKEKRRDRSESSHKAKRSVTSEERS
GSVSSPSRDLSPLGRRKSSSPKLSSQKPPASASPHRSRASPVRQQHSPSPSAPRHHSPSS
HSGSRSSAQRHTPSPRRRGRSPPSPSYLRSEPGPPASSSSPPPASSTLRHSRSPPTPRGP
SPPAQRRGSPSRRHSAGREKGGRAERERSPPTQEKRQERRDESRGRREKEGGRDERDYEP
EQSSLRDTRDDRESRDSRDRRDGRDRRDARDERPHRQDGKEARADTRSDARSTRDAPEHR
ERERERERERERDRERERPETHRKEDAAAPEDRGSYGKGHSREEGRGEARAEARTEARPE
ARTDTRAERVGRGRGRGAEPAEKGASRGSRTSPGERGHDWESRSGVRERSVERGSERGSD
SRATERGNERTTDRYGNERPRGEQARDSSYDRRSGHGERERRDNREREARAPSPGRHQSR
AEEPERDERRDERRAERGDERRDERTRERERERDREREREKEKEKEKEKEKEREAERERE
RVREREREREREEREREREREREREEREREREERERERERERKEREREREQRERERQREW
EEREKGREERRERRDEVRDDRPVRDAHEERKTSRKRHRVENSQSPRSSPKRVREASPADS
DGYNSTEEKREKHRLLSQVVRPQDPPRSPPRTPAEEKPSRWKEEDRRGDKKDVRGRGHEE
ARGGAADRRNEQEGATAVPDTRRGKEREASPPAIAPAPEEAKEAKEGRRDREPPAVHEEG
KKKTKAQKKGLKKSRREEERAGGVAGREERLTLEPVASIPPPETPPPLLSPRKMPKKKAL
DKKRKRSSKDSEGSEEEPGAVHHPLSKRRRGPRTPPPINKEDLLSQRVLAASQRSPLPLP
LSDWSDEDVPDRSEVPAPAPPPVPEPRTLLPTEPLPTRRLGRGRTDPPIAPLLPDPPMLL
PTPALLPLLPQHLLRKPLLPTAPLEQHPPPRGGSMGLLGNPTGRPARPARLRSPSNDAHR
DENPLAPRARRGRQPGGNAARDRERERERERERERDRERVAAIEPVGAERKSRIDQLRRG
EPSRSTSSDRQDSRSHSSRRSSPESERQARSRAGSYDSRERERERERDVFDRDRKDPRQP
PGPILGLGPAGVPPQQRDWEQEPQRDWGPRGGPREPLLPHRGANREPIRERERDPREPRE
RERLLPEGLLSGAVHERLERERERERAEREREHREREREWERERERERERGERERLLPFD
PMSHGEPKARGDGRIERGDFDPLLPREPAAIAPDKPADSVHVNSMKIIKSEPGVDEKGDS
LDAKSVYLTMFSHEDEVKGEDAQSMVSGGEEYEPISDDELDEILADSAQKREDQQDDERV
PGPLDVIDVDWSSLMPKQKQEPRAPGAALLRFTPGAVLLRAGVSRRLAGPQLLARVKEVC
KGELDDPKDADRLFEHDLGAINMAALNRRVERAALLRNLGSSCKALSARRDIAIRKQLLK
NDKGTTKQMYTGAPVGDSELLQLSVRLFKKTMASNQTSDLERPQPGTSSAPAAPPAEVCV
S
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcgaagaccatatctgacagcagt
actagcaccacaccctctcgaaggccaagcgtttttgagagactcggccccagcacagga
gggaatgccgctgagacacactgcagaaattggttaaagactgggaactgcagttacggc
aatacttgtcgctatacacatggaactcagccacggggcaaaggcttttctggaacgttt
agcaggtcagcagagaggcccacaggggatctcagggagaggatgaagaataagagacag
gatgttgaagcagatgcccagaaaagagacccagaagagcctacatcacccacaaccaga
cagcgcgactcatctcggggaaggcaccgggagaaagaagacataaagattaccaaggag
agaactccagcgagtgaggaagaaccagcagagtgggagggaacccgtgaagactctgat
aacggtgactacgactacgagttgtctttggaaatgaagagacagaagattcagcgcgag
ctgatgaagctcgaacaggagaacatggacaagagagaagagatcatcatcaagaaggag
gaaccgacctccaagaataggaccagcatgtccaaggcttcccctgaacgtggaagctcc
aaagggtccccctcgtcccgcaagtctagcggctcgcccaaatacaaggcatcagggaag
agcgcgggctctgtgaagaaggagaagtcgtcttcctcctctgtgatctcctctccgctg
tctgaccaggcccgcacagaggagtccgagggtcggttctctaaaggaagtcacgggaaa
aagaaagggccccgtacccccagcccccctcctcctgctcctgctcctgtggagacccac
gtggtggggaagaagcacaaaggcaaacacaagaacaaggagaagtctgaggaccgggcc
aaggagggcaaggatagaggccgtgacgtcgataagcacaaggaaaagaaagagaaacgc
agggaccggtcggagagctcccacaaggccaagaggtcagtgacctccgaggagcgctcc
ggaagtgtctcctccccctccagagatctgtcacctctcggccgaaggaagtcctcttca
cccaagttgtcttcccagaagccccctgcgtctgcgtccccacaccggtctcgtgcgtca
cccgtccgtcagcagcacagcccctccccctcagccccccgccaccactccccctcctcc
cactcgggctcccgctcctccgcccagagacacacgccctccccccgccgacgcggccgc
agccctccgtccccctcctacctgaggagcgagcccggtcccccggcctcctcctcctct
cctccccccgcctcctctactctgaggcactcgcgctcgcccccgaccccccgcggcccc
tcccctccggcccagcgccgcgggagccccagccgacggcactccgcgggccgagagaaa
ggggggcgcgctgaacgagagaggagcccccctacgcaggagaaacgccaggaacgcaga
gatgagagtcgaggtaggcgtgagaaggagggtggccgtgatgagcgggactacgagcca
gagcagagcagcctgcgagacacacgagacgatcgagagtccagggacagccgcgatcgg
cgcgacggcagggaccgccgggacgccagggacgagcggccgcaccggcaggacgggaag
gaggcccgcgccgacaccaggagcgacgcacgctcaacgcgagatgcccccgagcacagg
gagagggagcgtgagcgggagagagaaagggagcgagatcgcgagagggagcgtcccgag
acccacaggaaggaggacgccgccgccccagaggatcgtgggagttatgggaagggccac
agccgggaggagggaagaggtgaagcgcgggcggaggccaggactgaggccagacctgag
gccaggacagacacccgcgctgagagagtgggccgaggcaggggccgtggagccgagccg
gcagagaaaggtgcgtctcgaggttcgcgaacatcaccaggcgagcgtggccatgactgg
gagtctcggagcggtgtccgtgagcggagtgtggagaggggctcagagcgcggaagcgac
agcagagccaccgaacgaggaaacgagcgcaccaccgatcgctatggcaacgagcggccg
agaggagagcaggcccgagactcatcctatgaccgcaggagtggccatggggagcgggag
cgcagggacaaccgggaaagagaggcaagagcgccctctcctggtcgccaccagagccgc
gcagaggagccggagcgtgacgagcggagggatgagcgcagggcggagagaggggacgaa
cgccgagatgagcgaacccgggagagagaaagagagagagatcgtgagagggagagggag
aaggagaaagagaaagagaaggagaaagaaaaagagcgagaagcagaacgcgaaagggag
cgggtcagagagcgcgagcgtgagcgggagagggaagaacgagagcgggagagggagagg
gagcgggagagggaagaaagggagcgggagagggaagaaagggagcgggagagagagcga
gagaggaaggaaagggaacgggagagggagcagagggagcgggagcgacagcgagaatgg
gaagagagggagaagggaagagaggagcgaagggagaggagagatgaggtgagagacgac
cgcccagttcgagatgctcacgaggagcgcaagaccagcaggaagaggcacagagtggag
aacagccaaagccctcgctcctctcctaaacgcgtacgagaggccagccctgctgatagc
gacggctataatagcactgaggaaaaacgtgagaagcaccggctcttgagtcaggtggtc
cgtcctcaggaccctccccgctctcctccacgcacccctgctgaggaaaagccctcccgc
tggaaggaggaggatcgccgtggcgataagaaggacgtgcgtggacggggtcacgaagag
gcacgtggaggtgcagctgaccggcgtaacgagcaggagggcgcgacagctgtgccagac
accaggaggggcaaggagcgcgaggccagcccccctgccatcgcccccgcaccagaggag
gccaaggaggccaaggagggcaggagggacagggagccgcccgctgttcacgaggagggc
aagaagaagaccaaagcccagaagaagggcctgaagaagagcaggcgggaggaggagaga
gccgggggagttgctggacgtgaggagcgtttaaccctcgaacccgtcgctagcattccc
cctccagaaaccccaccgcccctcctctcccccaggaagatgcccaagaagaaagccctg
gacaagaaacgcaagcgctcctccaaggactctgaggggtcagaggaggagcctggagct
gtgcaccacccccttagcaagaggaggcgtggcccacgcacacccccaccaatcaacaaa
gaggacctgctttcccagagggttctagcagctagccagcgctcgcctctccccttgcct
ctcagcgactggtccgacgaggacgtgcccgaccgcagcgaggtcccggccccagctccc
ccgcccgtcccagagcccaggaccctactgcccacggagccactccccacccgacggctc
ggaaggggcaggacggaccctcccattgcccctctcctccccgatccccccatgctgttg
cccacgcctgccctgctgcccctgctgccccagcacctgctgcgtaagcccctcctgcca
acagccccactggagcagcatcccccgccacgcggcggcagcatgggcctcctgggcaac
cccacaggacgcccggcccgccctgcccgcctgcgctcaccctccaacgacgcccatcgt
gatgagaaccccctggctcccagggctcgccggggacgccaaccagggggcaacgctgcc
cgagaccgtgagcgcgagagagaaagagagcgtgagagggagcgcgaccgggagagggta
gccgccatcgagccggtgggggctgagcggaagtcacgcatcgaccagctgaggagagga
gagcctagtcgcagcacatcttcagatcgccaggactcccgaagccacagttcccggcga
agctccccagagtcggagcgtcaggcacgttctcgtgcaggctcctacgacagccgggaa
cgtgagcgagaacgcgagcgggacgtctttgaccgtgaccgcaaggaccctcggcagccg
ccgggcccgatccttggccttgggccagccggggtccccccgcagcagagagactgggag
caggagccacagagggactgggggcccagaggcgggcccagagagcccctgctgccacac
cggggggccaaccgtgagcccatccgagagcgggagcgagacccgagggagccgcgggaa
cgtgagcggctgctgccggaaggactcctgtcaggcgccgtgcacgagaggctggagcgc
gagcgagagagggagcgggcggagagagagcgcgagcatcgcgagcgggagcgggaatgg
gagcgagagagggagcgagaacgggagcgtggagagagggagaggctgctccccttcgac
cccatgtcccacggcgagcccaaggccagaggtgatgggcgcattgagcgtggagacttt
gatcccctgctgccgcgggagcccgccgctatagctcctgacaagccagcagacagcgtg
cacgtcaactccatgaaaataattaaaagcgagcctggtgtagatgagaagggcgatagc
ctagatgcaaaaagtgtctatctgaccatgttttcacacgaggacgaagtgaagggagaa
gacgcccagtctatggtttccggcggtgaagagtatgagccaatcagtgatgatgaactg
gatgagattctagcagacagcgctcagaagagagaggaccagcaggatgatgagagagtc
ccaggtcctctggatgtgattgatgtggactggtccagcctgatgcccaaacagaagcag
gagccgcgggctccaggggcagcgctgctcaggttcaccccgggggctgtgctgctcagg
gcgggcgtctcccgccggctggctgggcctcagctcctcgcgcgcgtcaaagaagtctgt
aaaggggagctggacgaccctaaagatgctgacaggctgtttgagcatgacctgggcgct
atcaacatggcggctctgaacaggcgtgtggagagggccgctcttctgcgcaacctgggc
tccagctgcaaagccctcagcgcccggcgggacattgccatccgtaagcagctgctcaag
aacgacaagggcaccaccaagcagatgtacaccggggccccagtgggagacagcgagctg
ctgcagctcagcgtgcggctctttaagaagaccatggcgtccaaccagacatctgatctg
gagcgtcctcagcctgggacgtctagtgccccagctgcccctcctgctgaggtgtgtgtc
tcctaa
DBGET
integrated database retrieval system
