Clupea harengus (Atlantic herring): 105890435
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Entry
105890435 CDS
T09045
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105890435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105890435
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105890435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
105890435
NCBI-ProteinID:
XP_031428113
Ensembl:
ENSCHAG00000008415
UniProt:
A0A6P8FP30
LinkDB
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Position
8:complement(20318843..20580517)
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AA seq
417 aa
AA seq
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MEGDGSQTTSGNSNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQTHHELDSKTIDPKVAFPRRTQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFECEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGARGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATTYSPVAAAAVAAAAARGSGRGARGRGGYMAYPQSAGPGFPDYGFYSAAAAAGG
EQRAGPCSFADYGSLGPQAAAQMLQSEHSASACTSPLQHLPSPEQFKSPGANPQRPGGFP
GANSPGPVADLYAASQDSGVGNYISAASPQPGSGFGHSIAVSIAGPLIATAFTNGYH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagccaaaccacctctggaaactcaaatgattcgcaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacatcaccagacagccttagagactat
ttcagtaaattcggggaaataagagaatgtatggtaatgagagatcctacgacaaaacga
tccagaggatttgggttcgttacgtttgcagatgccgccagcgtagataaagtcttagcg
caaacacaccacgaattagactcaaagacgattgatcctaaagttgccttccctcgacgc
actcaacctaagatggtcacaagaacaaagaaaatatttgtgggcggattatcggcgaac
acggtagttgaagatgtgaagcagtattttgaacagtttggaaaggtagaagacgccatg
cttatgtttgataagacgactaacaggcatagaggttttggcttcgtaactttcgagtgc
gaggacgtcgtagagaaagtctgtgaaattcatttccatgaaatcaataataaaatggtg
gaatgtaagaaggcccaaccaaaggaggtgatgttccccccaggagcacgaggacgagcc
agagggcttccttacaccatggacgccttcatgctggggatgggcatgctgagttaccca
aacattgtggcgacctatggccgtggctacactggattcgcccccagctatagctaccag
tttcccggtttcccagcgacgacgtacagtcccgtggcggcagcggcggtagcagcggca
gcagcacgaggctcaggtaggggcgcccgcgggagaggcggatacatggcgtacccgcag
agcgcagggccaggcttccctgattatggcttttactcggcggcggcggcggcgggcggg
gagcagcgcgcgggcccctgctcctttgcagactacggctccctggggccgcaggccgct
gcacagatgctgcagagcgagcactccgcctcggcctgcacctcccctctccagcacctg
cccagcccggagcagtttaagagcccaggcgcaaatcctcaacgccctggtgggttcccc
ggcgccaacagcccgggccccgtggccgacctgtacgctgccagccaggactctggcgtg
ggcaactacatcagcgctgccagcccccagcctggctccggctttgggcacagtatcgct
gtgagtatcgctggcccgctgattgcgaccgctttcacaaacggataccactga
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