Clupea harengus (Atlantic herring): 105890564
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Entry
105890564 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105890564
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF648
Motif
Other DBs
NCBI-GeneID:
105890564
NCBI-ProteinID:
XP_031418252
Ensembl:
ENSCHAG00000004373
UniProt:
A0A6P8F561
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Position
24:complement(11564234..11582903)
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AA seq
613 aa
AA seq
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MSGDPPHMPAPVCLIENEGEGLKTMESALDTLKKIQQPVVVVAVVGLYRTGKSYLMNRLA
GQQSGFALGSTIESKTKGIWMWCVPHPSKPGHTLLLLDTEGLGDVNKGNSKNDAWIFCLA
VLLSSTLVYNSRGTIDNDAVEKLHYVTEITDHVKIKSPGARDEDGDEEDCKFVRFFPDFV
WAVRDFTLERKIDGHDVSEDEYLDFALQLKKGQSTKVLTYNQPRQCIRNFFPTRKCFTFP
FPTLTQKMTNLDSMTEADLFPEFLDVAERFCSKVFEVSRVKTVQGGQEVTGSQFSHLVKI
YVDTINSGNVPCLENAVVAMAEIGNQSAVDAGFQLYEQAMGNLRTTFPTDLETVSAEHLR
LNGLAMQEFHKNSFKDEGEKYMKQLEEKVSQLYKQLNTLNKEASEELCRKVLLELYEPMA
VNIHHGSYLKPGGYEIYCRDRDAMVAEYKQHDKKGMKGEQVLEEFLQEKNAEANSILKAD
QRLTEADKMAAEAKEREKVQEQKIIAMEQRHHALERALEDLRLSREQDLRRLKEKMEEEK
RFQHEELDRALKSKLKEYKEMMEKGLKDQADILGQEIDQIRQEKGQFQEPGYLDKFVEMG
SDLIPDFLRRMFE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagatccaccccacatgccagcacctgtgtgcttgattgagaatgaaggggag
ggactgaagacgatggaatcagccctggacaccctcaagaagatccagcagcctgtggtg
gtggtggctgtggtggggttgtaccgcactggcaagtcttacctcatgaatcggctagct
gggcaacagtcaggctttgctctgggcagcaccattgagtctaagaccaaaggcatctgg
atgtggtgtgtgcctcacccctctaaaccaggacatacgctgttgctgttagacactgaa
ggactgggtgatgtcaacaagggcaactcgaagaacgatgcctggatcttttgtctggcc
gtgctgctcagtagcaccctggtgtacaacagcagaggaaccatcgataacgatgctgta
gagaaactccactatgtgactgagataaccgatcacgtcaagataaagtcaccgggcgcc
cgtgatgaggatggcgatgaggaggactgtaagtttgtccgcttcttccctgacttcgtc
tgggccgttcgggacttcactctggagaggaagatcgatggtcatgacgtgagcgaggac
gagtacctggactttgccctgcagctgaagaaaggtcagtctactaaagtattgacctac
aaccaaccgagacagtgcatacggaacttcttcccgacacggaagtgcttcaccttcccg
ttcccaacgttgacgcaaaaaatgacgaacctggactccatgactgaggccgaccttttc
ccagaattcctggatgtcgctgaacgcttctgcagtaaagtctttgaagtgagccgcgtc
aagacggtacagggtggtcaggaggtcaccggcagccagttcagccatcttgtgaagatc
tacgtggacaccatcaacagtggcaacgttccctgtctggagaatgctgtggttgccatg
gcagagatcggaaaccagtcggccgtggatgcgggcttccagctctatgagcaggcaatg
gggaatttgaggacgacctttcccacggatcttgaaactgtctctgctgaacatcttcgc
ctcaacggcctggcaatgcaggaattccacaaaaattccttcaaggatgaaggcgagaaa
tacatgaagcagctggaggagaaggtgtctcagctctataagcagcttaacactctgaac
aaggaggcctcggaggagctttgtcggaaggttctcttggagctgtacgaaccaatggcc
gtcaacattcaccacggcagctatctcaagccaggtgggtatgagatctactgccgtgac
cgagacgccatggtggccgagtacaagcaacatgacaagaagggaatgaagggggaacag
gtgttggaagagtttctccaggagaagaacgctgaagcaaactccatcctgaaggctgat
cagagactcacagaggccgacaagatggcggccgaggccaaagagagggagaaggtgcag
gagcagaagatcattgccatggagcagcggcatcatgccctggagcgcgccctggaggac
ctgcgtctcagcagggagcaggatcttaggcgcctgaaggagaagatggaggaggagaag
cggttccagcacgaggagttggatcgagccctgaagagcaaactgaaggagtacaaggag
atgatggagaagggcctcaaggaccaggctgatatcttgggccaggagatcgatcaaatc
cgtcaggagaaggggcagtttcaagagccagggtatttggataaatttgttgagatgggc
agtgatctcattcccgacttcctgcgtagaatgtttgagtaa
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