KEGG   Clupea harengus (Atlantic herring): 105890564
Entry
105890564         CDS       T09045                                 
Name
(RefSeq) guanylate-binding protein 1-like
  KO
K20899  guanylate-binding protein 1/3/4/7
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    105890564
SSDB
Motif
Pfam: GBP GBP_C MMR_HSR1 RHD3_GTPase DUF648
Other DBs
NCBI-GeneID: 105890564
NCBI-ProteinID: XP_031418252
Ensembl: ENSCHAG00000004373
UniProt: A0A6P8F561
LinkDB
Position
24:complement(11564234..11582903)
AA seq 613 aa
MSGDPPHMPAPVCLIENEGEGLKTMESALDTLKKIQQPVVVVAVVGLYRTGKSYLMNRLA
GQQSGFALGSTIESKTKGIWMWCVPHPSKPGHTLLLLDTEGLGDVNKGNSKNDAWIFCLA
VLLSSTLVYNSRGTIDNDAVEKLHYVTEITDHVKIKSPGARDEDGDEEDCKFVRFFPDFV
WAVRDFTLERKIDGHDVSEDEYLDFALQLKKGQSTKVLTYNQPRQCIRNFFPTRKCFTFP
FPTLTQKMTNLDSMTEADLFPEFLDVAERFCSKVFEVSRVKTVQGGQEVTGSQFSHLVKI
YVDTINSGNVPCLENAVVAMAEIGNQSAVDAGFQLYEQAMGNLRTTFPTDLETVSAEHLR
LNGLAMQEFHKNSFKDEGEKYMKQLEEKVSQLYKQLNTLNKEASEELCRKVLLELYEPMA
VNIHHGSYLKPGGYEIYCRDRDAMVAEYKQHDKKGMKGEQVLEEFLQEKNAEANSILKAD
QRLTEADKMAAEAKEREKVQEQKIIAMEQRHHALERALEDLRLSREQDLRRLKEKMEEEK
RFQHEELDRALKSKLKEYKEMMEKGLKDQADILGQEIDQIRQEKGQFQEPGYLDKFVEMG
SDLIPDFLRRMFE
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgtctggagatccaccccacatgccagcacctgtgtgcttgattgagaatgaaggggag
ggactgaagacgatggaatcagccctggacaccctcaagaagatccagcagcctgtggtg
gtggtggctgtggtggggttgtaccgcactggcaagtcttacctcatgaatcggctagct
gggcaacagtcaggctttgctctgggcagcaccattgagtctaagaccaaaggcatctgg
atgtggtgtgtgcctcacccctctaaaccaggacatacgctgttgctgttagacactgaa
ggactgggtgatgtcaacaagggcaactcgaagaacgatgcctggatcttttgtctggcc
gtgctgctcagtagcaccctggtgtacaacagcagaggaaccatcgataacgatgctgta
gagaaactccactatgtgactgagataaccgatcacgtcaagataaagtcaccgggcgcc
cgtgatgaggatggcgatgaggaggactgtaagtttgtccgcttcttccctgacttcgtc
tgggccgttcgggacttcactctggagaggaagatcgatggtcatgacgtgagcgaggac
gagtacctggactttgccctgcagctgaagaaaggtcagtctactaaagtattgacctac
aaccaaccgagacagtgcatacggaacttcttcccgacacggaagtgcttcaccttcccg
ttcccaacgttgacgcaaaaaatgacgaacctggactccatgactgaggccgaccttttc
ccagaattcctggatgtcgctgaacgcttctgcagtaaagtctttgaagtgagccgcgtc
aagacggtacagggtggtcaggaggtcaccggcagccagttcagccatcttgtgaagatc
tacgtggacaccatcaacagtggcaacgttccctgtctggagaatgctgtggttgccatg
gcagagatcggaaaccagtcggccgtggatgcgggcttccagctctatgagcaggcaatg
gggaatttgaggacgacctttcccacggatcttgaaactgtctctgctgaacatcttcgc
ctcaacggcctggcaatgcaggaattccacaaaaattccttcaaggatgaaggcgagaaa
tacatgaagcagctggaggagaaggtgtctcagctctataagcagcttaacactctgaac
aaggaggcctcggaggagctttgtcggaaggttctcttggagctgtacgaaccaatggcc
gtcaacattcaccacggcagctatctcaagccaggtgggtatgagatctactgccgtgac
cgagacgccatggtggccgagtacaagcaacatgacaagaagggaatgaagggggaacag
gtgttggaagagtttctccaggagaagaacgctgaagcaaactccatcctgaaggctgat
cagagactcacagaggccgacaagatggcggccgaggccaaagagagggagaaggtgcag
gagcagaagatcattgccatggagcagcggcatcatgccctggagcgcgccctggaggac
ctgcgtctcagcagggagcaggatcttaggcgcctgaaggagaagatggaggaggagaag
cggttccagcacgaggagttggatcgagccctgaagagcaaactgaaggagtacaaggag
atgatggagaagggcctcaaggaccaggctgatatcttgggccaggagatcgatcaaatc
cgtcaggagaaggggcagtttcaagagccagggtatttggataaatttgttgagatgggc
agtgatctcattcccgacttcctgcgtagaatgtttgagtaa

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