Clupea harengus (Atlantic herring): 105890589
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Entry
105890589 CDS
T09045
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105890589 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105890589 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105890589 (farsb)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
105890589 (farsb)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (U)
105890589 (farsb)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105890589 (farsb)
Prokaryotic type
105890589 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
105890589
NCBI-ProteinID:
XP_031429936
Ensembl:
ENSCHAG00000010287
UniProt:
A0A6P8G2D6
LinkDB
All DBs
Position
9:29486343..29504036
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AA seq
589 aa
AA seq
DB search
MPTVGVKRDLLFQALGRTYSDEEFDELCFEFGLELDEITSERDMISREQGDERASAASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKQRIEAPRYRCVKASGGEAQKLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DILFSPLNQTKEYTATQLMDLYKTDSHLRHYLHIIEDEPLYPVIYDSNGVVLSMPPIING
NHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFSEYCAEPFTVEEAEVMYPDGRCCVY
PELAYRTETLSGEFINRRVGIKESAENIAGLLTRMCLRSEVTGQGDQIKVEIPPTRSDVI
HACDIMEDAAIAYGFNNITRTTPKTYTVANQLPLNKLTELLRTDLAAAGFTEGLTFTLCS
QEDIADKLGKNIKDIKAVHIANPKTAEFQVARTTLLPGLLKTLAANRKMPLPLKLFEISD
VVMKDDKKDVGARNNRRLCAVFYNKSPGFEVIHGLLDRVMQLLEVKPDHRHGYSIQAVED
STFFPGRCAEIFARGQSVGRLGVLHPDVITRFELTLPCSALDLDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgttggcgtgaaacgggaccttctattccaggctttggggagaacatacagt
gatgaggagtttgacgagctgtgttttgagtttggactggagttggatgagatcacgtcg
gagcgggacatgatcagtcgggagcagggggatgagcgtgcgtccgcagcctcggatgtg
gtgctctacaagatcgatgtccccgccaaccgatacgacctgctctgcctggagggactg
gtgcgaggcctgcaggtcttcaagcagaggattgaggcccctcgatacaggtgtgtcaaa
gcctctggtggggaagctcagaagctcatcataactaaagagacggcagctgtgaggccc
catgcagtggctgctgtgttgaggaacatcaccttcacccaggagcgctacgacagcttc
atcgagctgcaggagaaactccaccagaacgtctgcaggaagaggaccctggttgccata
ggaacccatgacctggacaccatcagtggtccgttcacgtacacggccaaaccgcccggc
gacatcctcttctcgcctctcaaccagaccaaggagtacaccgccacccagctcatggac
ctctacaagacggacagccacctacggcactacctgcacatcatcgaggacgagccgctc
taccccgtcatctacgacagcaacggagtagtgctctccatgccccccatcatcaacggg
aaccattccaaaatctccctcaacacaaagaatgttttcattgagtgtacagctacagat
ctcacaaaggcaaagattgttctggacatgatggtgaccatgtttagcgagtactgtgct
gagcccttcacggtggaagaggctgaagtcatgtaccctgatggacggtgctgtgtgtac
cctgagctggcctacaggacagagacgctctcaggagagttcatcaaccgcagagtgggc
atcaaggagtctgctgagaacatcgccgggctgctgacgcgcatgtgcttgaggtcggag
gtcacgggccagggcgaccagatcaaggtggagatcccgcccacacgctctgatgtcatc
cacgcctgtgacatcatggaggacgccgccatcgcctacggctttaacaacatcacccgc
accacgcccaaaacctacaccgtagccaatcagctcccattgaataagttgacagagttg
ctgaggactgacctggctgcagctggattcaccgagggactcacgttcactctgtgttct
caggaggacatagctgataaattggggaagaacataaaggatatcaaagctgtccacatc
gccaacccaaagactgcagagttccaggtggcacgcaccactctgttgccagggttactg
aagactctggctgccaatcgcaagatgcctctccctctcaagctgtttgagatctcagac
gttgtcatgaaggacgataagaaagatgtgggagcgcgtaataaccggcgcctgtgtgcg
gtgttctacaataagtctccgggcttcgaggtcatccacgggctcctggaccgggtcatg
cagctgctggaggtcaagccggaccatcgccacggttacagcatccaggcagtggaagat
tcaaccttcttcccgggccgctgtgcagagatctttgcgcgcgggcagagtgtgggacgc
ctcggggtccttcatccagacgtgatcacccgcttcgagctcacgctgccctgctccgcc
ctcgacctggacatcgagcctttcctgtga
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